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    Article

    Validation of biomarkers of aging

    The search for biomarkers that quantify biological aging (particularly ‘omic’-based biomarkers) has intensified in recent years. Such biomarkers could predict aging-related outcomes and could serve as surrogat...

    Mahdi Moqri, Chiara Herzog, Jesse R. Poganik, Kejun Ying in Nature Medicine (2024)

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    Article

    Epigenetic moderators of naltrexone efficacy in reducing heavy drinking in Alcohol Use Disorder: a randomized trial

    Polymorphisms in genes associated with opioid signaling and dopamine reuptake and inactivation may moderate naltrexone efficacy in Alcohol Use Disorder (AUD), but the effects of epigenetic modification of thes...

    Joseph P. Schacht, Michaela Hoffman, Brian H. Chen in The Pharmacogenomics Journal (2022)

  3. No Access

    Article

    The trans-ancestral genomic architecture of glycemic traits

    Glycemic traits are used to diagnose and monitor type 2 diabetes and cardiometabolic health. To date, most genetic studies of glycemic traits have focused on individuals of European ancestry. Here we aggregate...

    Ji Chen, Cassandra N. Spracklen, Gaëlle Marenne, Arushi Varshney in Nature Genetics (2021)

  4. Article

    Open Access

    Novel age-associated DNA methylation changes and epigenetic age acceleration in middle-aged African Americans and whites

    African Americans (AAs) experience premature chronic health outcomes and longevity disparities consistent with an accelerated aging phenotype. DNA methylation (DNAm) levels at specific CpG positions are hallma...

    Salman M. Tajuddin, Dena G. Hernandez, Brian H. Chen in Clinical Epigenetics (2019)

  5. Article

    Open Access

    Analysis of repeated leukocyte DNA methylation assessments reveals persistent epigenetic alterations after an incident myocardial infarction

    Most research into myocardial infarctions (MIs) have focused on preventative efforts. For survivors, the occurrence of an MI represents a major clinical event that can have long-lasting consequences. There has...

    Cavin K. Ward-Caviness, Golareh Agha, Brian H. Chen in Clinical Epigenetics (2018)

  6. Article

    Open Access

    GWAS of epigenetic aging rates in blood reveals a critical role for TERT

    DNA methylation age is an accurate biomarker of chronological age and predicts lifespan, but its underlying molecular mechanisms are unknown. In this genome-wide association study of 9907 individuals, we find ...

    Ake T. Lu, Luting Xue, Elias L. Salfati, Brian H. Chen in Nature Communications (2018)

  7. Article

    Open Access

    DNA methylation signatures of chronic low-grade inflammation are associated with complex diseases

    Chronic low-grade inflammation reflects a subclinical immune response implicated in the pathogenesis of complex diseases. Identifying genetic loci where DNA methylation is associated with chronic low-grade inf...

    Symen Ligthart, Carola Marzi, Stella Aslibekyan, Michael M. Mendelson in Genome Biology (2016)

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    Article

    Identification of common genetic variants controlling transcript isoform variation in human whole blood

    Christopher O'Donnell and colleagues report a genome-wide screen for splicing quantitative trait loci (sQTLs) in 5,257 human blood samples. They identify cis sQTLs affecting mRNA isoform variation for over 2,000 ...

    **aoling Zhang, Roby Joehanes, Brian H Chen, Tianxiao Huan, Saixia Ying in Nature Genetics (2015)

  9. No Access

    Article

    Genome-wide identification of microRNA expression quantitative trait loci

    Identification of microRNA expression quantitative trait loci (miR-eQTL) can yield insights into regulatory mechanisms of microRNA transcription, and can help elucidate the role of microRNA as mediators of com...

    Tianxiao Huan, Jian Rong, Chunyu Liu, **aoling Zhang in Nature Communications (2015)

  10. No Access

    Article

    A systematic heritability analysis of the human whole blood transcriptome

    Genome-wide expressio n quantitative trait locus (eQTL) map** may reveal common genetic variants regulating gene expression. In addition to map** eQTLs, we systematically evaluated the heritability of the ...

    Tianxiao Huan, Chunyu Liu, Roby Joehanes, **aoling Zhang, Brian H. Chen in Human Genetics (2015)

  11. Article

    Open Access

    DNA methylation age of blood predicts all-cause mortality in later life

    DNA methylation levels change with age. Recent studies have identified biomarkers of chronological age based on DNA methylation levels. It is not yet known whether DNA methylation age captures aspects of biolo...

    Riccardo E Marioni, Sonia Shah, Allan F McRae, Brian H Chen in Genome Biology (2015)