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  1. Article

    Open Access

    High-spatial resolution epidemic surveillance of bacterial meningitis in the African meningitis belt in Burkina Faso

    Despite improved surveillance capacities and WHO recommendations for subdistrict analysis, routine epidemic surveillance of acute bacterial meningitis in the African meningitis belt remains largely limited to ...

    Maxime Woringer, Souleymane Porgho, Christophe Fermanian in Scientific Reports (2022)

  2. No Access

    Article

    Spatial CART classification trees

    We propose to extend CART for bivariate marked point processes to provide a segmentation of the space into homogeneous areas for interaction between marks. While usual CART tree considers marginal distribution...

    Avner Bar-Hen, Servane Gey, Jean-Michel Poggi in Computational Statistics (2021)

  3. Article

    Open Access

    An integrative modeling approach to the age-performance relationship in mammals at the cellular scale

    Physical and cognitive performances change across lifespan. Studying cohorts of individuals in specific age ranges and athletic abilities remains essential in assessing the underlying physiological mechanisms ...

    Geoffroy Berthelot, Avner Bar-Hen, Adrien Marck, Vincent Foulonneau in Scientific Reports (2019)

  4. No Access

    Article

    Influence Measures for CART Classification Trees

    This paper deals with measuring the influence of observations on the results obtained with CART classification trees. To define the influence of individuals on the analysis, we use influence measures to propos...

    Avner Bar-Hen, Servane Gey, Jean-Michel Poggi in Journal of Classification (2015)

  5. Article

    Open Access

    Drug sales data analysis for outbreak detection of infectious diseases: a systematic literature review

    This systematic literature review aimed to summarize evidence for the added value of drug sales data analysis for the surveillance of infectious diseases.

    Mathilde Pivette, Judith E Mueller, Pascal Crépey, Avner Bar-Hen in BMC Infectious Diseases (2014)

  6. No Access

    Book

  7. No Access

    Chapter

    A Model-Based Dimension Reduction Approach to Classification of Gene Expression Data

    The monitoring of the expression profiles of thousands of genes have proved to be particularly promising for biological classification, particularly for cancer diagnosis. However, microarray data present major...

    Luca Scrucca, Avner Bar-Hen in Advances in Theoretical and Applied Statistics (2013)

  8. No Access

    Article

    A Criterion Based on the Mahalanobis Distance for Cluster Analysis with Subsampling

    A two-level data set consists of entities of a higher level (say populations), each one being composed of several units of the lower level (say individuals). Observations are made at the individual level, wher...

    Nicolas Picard, Avner Bar-Hen in Journal of Classification (2012)

  9. No Access

    Article

    Yield stability in clones of Coffea canephora in the short and medium term: longitudinal data analyses and measures of stability over time

    In perennial crops like coffee, genetic improvement efficiency is limited by several factors. These include determining the acceptable minimum observation period for yield traits, and also variation of the tra...

    Christian Cilas, Christophe Montagnon, Avner Bar-Hen in Tree Genetics & Genomes (2011)

  10. No Access

    Article

    Spatial gradient of temperature and potential vegetation feedback across Europe during the late Quaternary

    After the last glacial maximum (LGM; 18,000 years. bp) plants migrated onto areas made free by the retreating ice sheets. Pollen records document changes in ecosystems and are an important proxy for the reconstru...

    Rachid Cheddadi, Avner Bar-Hen in Climate Dynamics (2009)

  11. Article

    Open Access

    A novel method for measuring patients' adherence to insulin dosing guidelines: introducing indicators of adherence

    Diabetic type 1 patients are often advised to use dose adjustment guidelines to calculate their doses of insulin. Conventional methods of measuring patients' adherence are not applicable to these cases, becaus...

    Massoud Toussi, Carine Choleau, Gérard Reach in BMC Medical Informatics and Decision Making (2008)

  12. Article

    Open Access

    Design of a graphical and interactive interface for facilitating access to drug contraindications, cautions for use, interactions and adverse effects

    Drug iatrogeny is important but could be decreased if contraindications, cautions for use, drug interactions and adverse effects of drugs described in drug monographs were taken into account. However, the phys...

    Jean-Baptiste Lamy, Alain Venot in BMC Medical Informatics and Decision Making (2008)

  13. No Access

    Article

    Asymptotic Distribution of Density-Dependent Stage-Grouped Population Dynamics Models

    Matrix models are widely used in biology to predict the temporal evolution of stage-structured populations. One issue related to matrix models that is often disregarded is the sampling variability. As the samp...

    Mélanie Zetlaoui, Nicolas Picard, Avner Bar-Hen in Acta Biotheoretica (2008)

  14. Article

    Open Access

    Normalization for triple-target microarray experiments

    Most microarray studies are made using labelling with one or two dyes which allows the hybridization of one or two samples on the same slide. In such experiments, the most frequently used dyes are Cy 3 and Cy 5. ...

    Marie-Laure Martin-Magniette, Julie Aubert, Avner Bar-Hen in BMC Bioinformatics (2008)

  15. Article

    Open Access

    An iconic language for the graphical representation of medical concepts

    Many medication errors are encountered in drug prescriptions, which would not occur if practitioners could remember the drug properties. They can refer to drug monographs to find these properties, however drug...

    Jean-Baptiste Lamy, Catherine Duclos in BMC Medical Informatics and Decision Making (2008)

  16. No Access

    Chapter and Conference Paper

    Spatio-temporal Functional Regression on Paleoecological Data

    The aim of this presentation is modeling the relationship between genetic diversity (represented by a positive number) and curves of temperature and precipitation. Our model links the genetic measure to the cl...

    Avner Bar-Hen, Liliane Bel, Rachid Cheddadi in Functional and Operatorial Statistics (2008)

  17. No Access

    Article

    Estimation of the density of a clustered point pattern using a distance method

    Distance-based methods use point-to-point distances or random-location-to-point distances in a cloud of points to estimate characteristics of the point pattern. One such characteristics is the density of point...

    Nicolas Picard, Avner Bar-Hen in Environmental and Ecological Statistics (2007)

  18. Article

    Open Access

    A constrained polynomial regression procedure for estimating the local False Discovery Rate

    In the context of genomic association studies, for which a large number of statistical tests are performed simultaneously, the local False Discovery Rate (lFDR), which quantifies the evidence of a specific gene a...

    Cyril Dalmasso, Avner Bar-Hen, Philippe Broët in BMC Bioinformatics (2007)

  19. No Access

    Chapter

    Discriminant Analysis Based on Continuous and Discrete Variables

    Avner Bar-Hen, Jean-Jacques Daudin in Statistical Methods for Biostatistics and … (2007)

  20. No Access

    Article

    Simulation study of dissimilarity between point process

    The spatial distributions of two species of tree result in a bivariate pattern. This pattern characterizes biological mechanism involved within a forest with the spatial localization of the trees. If we consid...

    Avner Bar-Hen, Nicolas Picard in Computational Statistics (2006)