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  1. Article

    Open Access

    Protein degradation by human 20S proteasomes elucidates the interplay between peptide hydrolysis and splicing

    If and how proteasomes catalyze not only peptide hydrolysis but also peptide splicing is an open question that has divided the scientific community. The debate has so far been based on immunopeptidomics, in vi...

    Wai Tuck Soh, Hanna P. Roetschke, John A. Cormican, Bei Fang Teo in Nature Communications (2024)

  2. Article

    Open Access

    Multiple redox switches of the SARS-CoV-2 main protease in vitro provide opportunities for drug design

    Besides vaccines, the development of antiviral drugs targeting SARS-CoV-2 is critical for preventing future COVID outbreaks. The SARS-CoV-2 main protease (Mpro), a cysteine protease with essential functions in vi...

    Lisa-Marie Funk, Gereon Poschmann, Fabian Rabe von Pappenheim in Nature Communications (2024)

  3. No Access

    Article

    Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5′-monophosphate decarboxylase catalysis

    The origins of enzyme catalysis have been attributed to both transition-state stabilization as well as ground-state destabilization of the substrate. For the latter paradigm, the enzyme orotidine-5′-monophosph...

    Sören Rindfleisch, Matthias Krull, Jon Uranga, Tobias Schmidt in Nature Catalysis (2022)

  4. No Access

    Chapter

    Fatty Acid Synthase: Structure, Function, and Regulation

    Fatty acid (FA) biosynthesis plays a central role in the metabolism of living cells as building blocks of biological membranes, energy reserves of the cell, and precursors to second messenger molecules. In kee...

    Aybeg N. Günenc, Benjamin Graf, Holger Stark in Macromolecular Protein Complexes IV (2022)

  5. No Access

    Article

    Atomic-resolution protein structure determination by cryo-EM

    Single-particle electron cryo-microscopy (cryo-EM) is a powerful method for solving the three-dimensional structures of biological macromolecules. The technological development of transmission electron microsc...

    Ka Man Yip, Niels Fischer, Elham Paknia, Ashwin Chari, Holger Stark in Nature (2020)

  6. No Access

    Article

    Cryo-EM in drug discovery: achievements, limitations and prospects

    Recent technological advances with cryo-electron microscopy (cryo-EM) — a biophysical technique that can be used to determine the structure of biological macromolecules and assemblies — have raised hopes that ...

    Jean-Paul Renaud, Ashwin Chari, Claudio Ciferri in Nature Reviews Drug Discovery (2018)

  7. Article

    Open Access

    Long-range allosteric regulation of the human 26S proteasome by 20S proteasome-targeting cancer drugs

    The proteasome holoenzyme is the major non-lysosomal protease; its proteolytic activity is essential for cellular homeostasis. Thus, it is an attractive target for the development of chemotherapeutics. While t...

    David Haselbach, Jil Schrader, Felix Lambrecht, Fabian Henneberg in Nature Communications (2017)

  8. No Access

    Article

    ProteoPlex: stability optimization of macromolecular complexes by sparse-matrix screening of chemical space

    ProteoPlex optimizes buffer conditions for the isolation and purification of macromolecular complexes. The concurrent complex stabilization is beneficial for structure determination using X-ray crystallography...

    Ashwin Chari, David Haselbach, Jan-Martin Kirves, Juergen Ohmer in Nature Methods (2015)