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Article
Open AccessPathling: analytics on FHIR
Health data analytics is an area that is facing rapid change due to the acceleration of digitization of the health sector, and the changing landscape of health data and clinical terminology standards. Our rese...
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Article
The GA4GH Phenopacket schema defines a computable representation of clinical data
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Article
Open AccessOntoserver: a syndicated terminology server
Even though several high-quality clinical terminologies, such as SNOMED CT and LOINC, are readily available, uptake in clinical systems has been slow and many continue to capture information in plain text or u...
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Article
Open AccessTowards achieving semantic interoperability of clinical study data with FHIR
Observational clinical studies play a pivotal role in advancing medical knowledge and patient healthcare. To lessen the prohibitive costs of conducting these studies and support evidence-based medicine, result...
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Chapter and Conference Paper
Oyster: A Tool for Fine-Grained Ontological Annotations in Free-Text
Oyster is a web-based annotation tool that allows users to annotate free-text with respect to concepts defined in formal knowledge resources such as large domain ontologies. The tool has been explicitly desi...