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  1. No Access

    Article

    Cold tolerance SNPs and candidate gene mining in the soybean germination stage based on genome-wide association analysis

    Three QTLs associated with low-temperature tolerance were identified by genome-wide association analysis, and 15 candidate genes were identified by haplotype analysis and gene expression analyses.

    Yuehan Chen, Zhi Liu, Dezhi Han, Qing Yang, Chenhui Li in Theoretical and Applied Genetics (2024)

  2. No Access

    Article

    Combining genome-wide association study and linkage map** in the genetic dissection of amylose content in maize (Zea mays L.)

    Integrated linkage and association analysis revealed genetic basis across multiple environments. The genes Zm00001d003102 and Zm00001d015905 were further verified to influence amylose content using gene-based ass...

    Wei Dai, Qinglin Li, Tao Liu, ** Long, Yao He in Theoretical and Applied Genetics (2024)

  3. Article

    Retraction Note: Comparison of preoperative ultrasound and MRI in the diagnosis of microvascular invasion in hepatocellular carcinoma

    Yunmin Long, Zheng Lv, Shaoyi Wang, Bing Tang, Qin Li in Functional & Integrative Genomics (2024)

  4. Article

    Open Access

    Pancreatitis affects gut microbiota via metabolites and inflammatory cytokines: an exploratory two-step Mendelian randomisation study

    Previous studies have observed relationships between pancreatitis and gut microbiota; however, specific changes in gut microbiota abundance and underlying mechanisms in pancreatitis remain unknown. Metabolites...

    Yi-Fan Qiu, Jun Ye, **-** **e, **ao-Tong Mao in Molecular Genetics and Genomics (2024)

  5. No Access

    Article

    SbMYC2 mediates jasmonic acid signaling to improve drought tolerance via directly activating SbGR1 in sorghum

    SbMYC2 functions as a key regulator under JA signaling in enhancing drought tolerance of sorghum through direct activating SbGR1.

    Guangling Wang, Yufei Long, Xueying **, Zhen Yang in Theoretical and Applied Genetics (2024)

  6. No Access

    Article

    Single-cell RNA sequencing reveals the transcriptional heterogeneity of Tbx18-positive cardiac cells during heart development

    The T-box family transcription factor 18 (Tbx18) has been found to play a critical role in regulating the development of the mammalian heart during the primary stages of embryonic development while the cellula...

    **anglin Long, Jiangjun Wei, Qinghua Fang, **n Yuan in Functional & Integrative Genomics (2024)

  7. No Access

    Article

    Downregulation of the expression of subgenomic chromosome A7 genes promotes plant height in resynthesized allopolyploid Brassica napus

    Homoeolog expression bias and the gene dosage effect induce downregulation of genes on chromosome A7, causing a significant increase in the plant height of resynthesized allopolyploid Brassica napus.

    Kanglu Zhao, **g Dong, Junxiong Xu, Yanbo Bai in Theoretical and Applied Genetics (2023)

  8. No Access

    Article

    IGF2 is upregulated by its antisense RNA to potentiate pancreatic cancer progression

    Pancreatic cancer is a deadly cancer. More and more long noncoding RNAs (lncRNAs) have received confirmation to be dysregulated in tumors and exert the regulatory function. Studies have suggested that lncRNA i...

    Yuan Tian, Wenwen Han, Long Fu, **g Zhang in Functional & Integrative Genomics (2023)

  9. No Access

    Article

    Comparative transcriptome analysis reveals candidate genes related to the sex differentiation of Schisandra chinensis

    Schisandra chinensis is a monoecious plant with unisex flowers. The fruit of S. chinensis is of high medical with economic value. The yield of S. chinensis fruit is related to the ratio of its female and male flo...

    Ji-Long Cheng, Xue-** Wei, Yu Chen, Yao-Dong Qi in Functional & Integrative Genomics (2023)

  10. No Access

    Article

    Combined linkage analysis and association map** identifies genomic regions associated with yield-related and drought-tolerance traits in wheat (Triticum aestivum L.)

    Combined linkage analysis and association map** identified genomic regions associated with yield and drought tolerance, providing information to assist breeding for high yield and drought tolerance in wheat.

    Jie Guo, Jiahui Guo, Long Li, **onghui Bai, in Theoretical and Applied Genetics (2023)

  11. No Access

    Article

    Characterization and diversity of CRISPR/Cas systems in Klebsiella oxytoca

    CRISPR (clustered regularly interspaced short palindromic repeats)/Cas (CRISPR-associated protein) system is a crucial adaptive immune system for bacteria to resist foreign DNA infection. In this study, we inv...

    Jiaxue Zhao, Yanyan **, Jiangfeng Zhang, Yuefei ** in Molecular Genetics and Genomics (2023)

  12. No Access

    Article

    Depletion of PIEZO1 expression is accompanied by upregulating p53 signaling in mice with perioperative neurocognitive disorder

    As the common complications observed in surgical elder patients, perioperative neurocognitive disorders (PND) cause a series of serious perioperative health problems. However, there are no effective treatments...

    Fuhai Bai, Lu Huang, Zonghong Long, Min Zhang in Functional & Integrative Genomics (2023)

  13. No Access

    Article

    A quantitative assessment of (bacterio)chlorophyll assignments in the cryo-EM structure of the Chloracidobacterium thermophilum reaction center

    Chlorophylls and bacteriochlorophylls are the primary pigments used by photosynthetic organisms for light harvesting, energy transfer, and electron transfer. Many molecular structures of (bacterio)chlorophyll-...

    Christopher J. Gisriel, David A. Flesher, Zhuoran Long in Photosynthesis Research (2023)

  14. Article

    Correction to: Genome‑wide characterization of long terminal repeat retrotransposons provides insights into trait evolution of four cucurbit species

    Hai‑Nan Liu, Mao‑Song Pei, Charles Ampomah‑Dwamena in Functional & Integrative Genomics (2023)

  15. No Access

    Article

    Genome-wide characterization of long terminal repeat retrotransposons provides insights into trait evolution of four cucurbit species

    Cucurbits are a diverse plant family that includes economically important crops, such as cucumber, watermelon, melon, and pumpkin. Knowledge of the roles that long terminal repeat retrotransposons (LTR-RTs) ha...

    Hai-Nan Liu, Mao-Song Pei, Charles Ampomah-Dwamena in Functional & Integrative Genomics (2023)

  16. Article

    Open Access

    Plasma cell-free DNA promise monitoring and tissue injury assessment of COVID-19

    Coronavirus 2019 (COVID-19) is a complex disease that affects billions of people worldwide. Currently, effective etiological treatment of COVID-19 is still lacking; COVID-19 also causes damages to various orga...

    **n **, Yanqun Wang, **** Xu, Yimin Li, Fanjun Cheng in Molecular Genetics and Genomics (2023)

  17. No Access

    Article

    ZmAGO18b negatively regulates maize resistance against southern leaf blight

    Here, we report that ZmAGO18b encoding an argonaute protein is a negative regulator of maize resistance against southern leaf blight.

    Zhikang Dai, Qianhui Yang, Donghai Chen, Bingchen Li in Theoretical and Applied Genetics (2023)

  18. No Access

    Article

    Precisely map** a major QTL for grain weight on chromosome 5B of the founder parent Chuanmai42 in the wheat-growing region of southwestern China

    QTgw.saas-5B was validated as a major thousand-grain weight-related QTL in a founder parent used for wheat breeding and then precisely mapped to a 0.6 cM interval.

    Mei** Ye, Hongshen Wan, Wuyun Yang, Zehou Liu in Theoretical and Applied Genetics (2023)

  19. No Access

    Article

    Bioinformatic and functional analysis of OsDHN2 under cadmium stress

    As a toxic heavy metal, cadmium (Cd) is one of the principal pollutants influencing rice productivity and food security. Despite several studies, the underlying mechanism of Cd response in plants remains large...

    Wen-jun Jiang, Meng-ting Wang, Zhi-ye Du, Jia-hao Li in Functional & Integrative Genomics (2023)

  20. No Access

    Article

    A genome-wide co-expression network analysis revealed ZmNRAMP6-mediated regulatory pathway involved in maize tolerance to lead stress

    A metal transporter ZmNRAMP6 was identified by using a trait-associated co-expression network analysis at a genome-wide level. ZmNRAMP6 ...

    Peng Liu, Li Jiang, ** Long, Qinglin Li, Fengxia Hou in Theoretical and Applied Genetics (2023)

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