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  1. No Access

    Article

    Tracking-seq reveals the heterogeneity of off-target effects in CRISPR–Cas9-mediated genome editing

    The continued development of novel genome editors calls for a universal method to analyze their off-target effects. Here we describe a versatile method, called Tracking-seq, for in situ identification of off-t...

    Ming Zhu, Runda Xu, Junsong Yuan, Jiacheng Wang, **aoyu Ren in Nature Biotechnology (2024)

  2. Article

    Open Access

    NFKBIZ regulates NFκB signaling pathway to mediate tumorigenesis and metastasis of hepatocellular carcinoma by direct interaction with TRIM16

    Hepatocellular carcinoma (HCC) is a malignant tumor with high incidence and mortality rates. NFKBIZ, a member of the nuclear factor kappa B inhibitory family, is closely related to tumor progression. However, ...

    Danfeng Guo, Ming Zhang, Tingju Wei, **aodan Zhang in Cellular and Molecular Life Sciences (2024)

  3. Article

    Open Access

    FBP1 inhibits NSCLC stemness by promoting ubiquitination of Notch1 intracellular domain and accelerating degradation

    The existence of cancer stem cells is widely acknowledged as the underlying cause for the challenging curability and high relapse rates observed in various tumor types, including non-small cell lung cancer (NS...

    Tianyu He, Yanye Wang, Wang Lv, Yiqing Wang in Cellular and Molecular Life Sciences (2024)

  4. Article

    Open Access

    VNS improves VSMC metabolism and arteriogenesis in infarcted hearts through m/n-AChR-Akt-SDF-1α in adult male rats

    Vagal nerve stimulation (VNS) provides a novel therapeutic strategy for injured hearts by activating cholinergic anti-inflammatory pathways. However, little information is available on the metabolic pattern an...

    **ng-yuan Li, Jia-Qi Liu, Yan Wang, Yan Chen, Wen-hui Hu in Journal of Molecular Histology (2024)

  5. Article

    Open Access

    APC mutations disrupt β-catenin destruction complex condensates organized by Axin phase separation

    The Wnt/β-catenin pathway is critical to maintaining cell fate decisions. Recent study showed that liquid–liquid-phase separation (LLPS) of Axin organized the β-catenin destruction complex condensates in a nor...

    Dan Zhang, Qi-Qi Ni, Shu-Yang Wang, Wen-Feng He in Cellular and Molecular Life Sciences (2024)

  6. Article

    Open Access

    Sequencing by avidity enables high accuracy with low reagent consumption

    We present avidity sequencing, a sequencing chemistry that separately optimizes the processes of step** along a DNA template and that of identifying each nucleotide within the template. Nucleotide identifica...

    Sinan Arslan, Francisco J. Garcia, Minghao Guo in Nature Biotechnology (2024)

  7. No Access

    Article

    The role and mechanisms of microvascular damage in the ischemic myocardium

    Following myocardial ischemic injury, the most effective clinical intervention is timely restoration of blood perfusion to ischemic but viable myocardium to reduce irreversible myocardial necrosis, limit infar...

    Bang-Hao Zhao, Amanguli Ruze, Ling Zhao, Qiu-Lin Li in Cellular and Molecular Life Sciences (2023)

  8. Article

    Open Access

    Loss of fragile WWOX gene leads to senescence escape and genome instability

    Induction of DNA damage response (DDR) to ensure accurate duplication of genetic information is crucial for maintaining genome integrity during DNA replication. Cellular senescence is a DDR mechanism that prev...

    Hui-Ching Cheng, Po-Hsien Huang, Feng-Jie Lai in Cellular and Molecular Life Sciences (2023)

  9. No Access

    Article

    Circ-sh3rf3/GATA-4/miR-29a regulatory axis in fibroblast–myofibroblast differentiation and myocardial fibrosis

    The transdifferentiation from cardiac fibroblasts to myofibroblasts is an important event in the initiation of cardiac fibrosis. However, the underlying mechanism is not fully understood. Circ-sh3rf3 (circular...

    Cai-**a Ma, Zhi-Ru Wei, Tong Sun, Ming-Hui Yang in Cellular and Molecular Life Sciences (2023)

  10. No Access

    Article

    An active glutamine/α-ketoglutarate/HIF-1α axis prevents pregnancy loss by triggering decidual IGF1+GDF15+NK cell differentiation

    Deficiency of decidual NK (dNK) cell number and function has been widely regarded as an important cause of spontaneous abortion. However, the metabolic mechanism underlying the crosstalk between dNK cells and ...

    Shao-Liang Yang, Hai-**a Tan, Zhen-Zhen Lai in Cellular and Molecular Life Sciences (2022)

  11. Article

    Open Access

    Glioma stem cells and neural stem cells respond differently to BMP4 signaling

    Malignant glioma is a highly heterogeneous and invasive primary brain tumor characterized by high recurrence rates, resistance to combined therapy, and dismal prognosis. Glioma stem cells (GSCs) are likely res...

    **n-**n Han, Chunhui Cai, Li-Ming Yu, Min Wang, Wenhan Yang, Dai-Yu Hu in Cell Regeneration (2022)

  12. No Access

    Article

    BMSCs overexpressed ISL1 reduces the apoptosis of islet cells through ANLN carrying exosome, INHBA, and caffeine

    Early apoptosis of grafted islets is one of the main factors affecting the efficacy of islet transplantation. The combined transplantation of islet cells and bone marrow mesenchymal stem cells (BMSCs) can sign...

    Ying Wang, Jiang-Wei Zhang, **g-Wen Wang in Cellular and Molecular Life Sciences (2022)

  13. No Access

    Article

    miR-124 regulates early isolation-induced social abnormalities via inhibiting myelinogenesis in the medial prefrontal cortex

    Patients with autism spectrum disorder (ASD) typically experience substantial social isolation, which may cause secondary adverse effects on their brain development. miR-124 is the most abundant miRNA in the h...

    Yanli Zhang, Yingting Pang, Weixi Feng, Yuxi ** in Cellular and Molecular Life Sciences (2022)

  14. No Access

    Article

    Comprehensive plasma metabolomics and lipidomics of benign and malignant solitary pulmonary nodules

    Solitary pulmonary nodules (SPNs) are commonly found in imaging technologies, but are plagued by high false-positive rates.

    Wei Zhou, Lili Lin, Lian-yong Jiang, **-long Wu, Wei-chen Xu, Yang Zhou in Metabolomics (2022)

  15. Article

    Open Access

    Interferon-beta inhibits human glioma stem cell growth by modulating immune response and cell cycle related signaling pathways

    Malignant Glioma is characterized by strong self-renewal potential and immature differentiation potential. The main reason is that malignant glioma holds key cluster cells, glioma stem cells (GSCs). GSCs contr...

    **n-**n Han, Shengkai **, Li-Ming Yu, Min Wang, **n-Yu Hu, Dai-Yu Hu in Cell Regeneration (2022)

  16. Article

    Open Access

    Regulation and dysregulation of hair regeneration: aiming for clinical application

    Hair growth and regeneration represents a remarkable example of stem cell function. Recent progress emphasizes the micro- and macro- environment that controls the regeneration process. There is a shift from a ...

    Zhicao Yue, Fang Yang, Jianglin Zhang, Ji Li, Cheng-Ming Chuong in Cell Regeneration (2022)

  17. No Access

    Article

    Partitioning RNAs by length improves transcriptome reconstruction from short-read RNA-seq data

    The accuracy of methods for assembling transcripts from short-read RNA sequencing data is limited by the lack of long-range information. Here we introduce Ladder-seq, an approach that separates transcripts acc...

    Francisca Rojas Ringeling, Shounak Chakraborty, Caroline Vissers in Nature Biotechnology (2022)

  18. No Access

    Article

    Novel contact–kinin inhibitor sylvestin targets thromboinflammation and ameliorates ischemic stroke

    Ischemic stroke is a leading cause of death and disability worldwide. Increasing evidence indicates that ischemic stroke is a thromboinflammatory disease in which the contact–kinin pathway has a central role b...

    Zhiye Zhang, Chuanbin Shen, Mingqian Fang in Cellular and Molecular Life Sciences (2022)

  19. Article

    Open Access

    Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement

    Aegilops tauschii, the diploid wild progenitor of the D subgenome of bread wheat, is a reservoir of genetic diversity for improving bread wheat performance and environmental resilience. Here we sequenced 242 Ae. ...

    Kumar Gaurav, Sanu Arora, Paula Silva, Javier Sánchez-Martín in Nature Biotechnology (2022)

  20. No Access

    Article

    High-throughput map** of a whole rhesus monkey brain at micrometer resolution

    Whole-brain mesoscale map** in primates has been hindered by large brain sizes and the relatively low throughput of available microscopy methods. Here, we present an approach that combines primate-optimized ...

    Fang Xu, Yan Shen, Lufeng Ding, Chao-Yu Yang, Heng Tan, Hao Wang in Nature Biotechnology (2021)

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