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  1. No Access

    Protocol

    Enzymatic Preparation of DNA with an Expanded Genetic Alphabet Using Terminal Deoxynucleotidyl Transferase and Its Applications

    Efficient preparation of DNA oligonucleotides containing unnatural nucleobases (UBs) that can pair with their cognates to form unnatural base pairs (UBPs) is an essential prerequisite for the application of UB...

    Guangyuan Wang, Yuhui Du, Tingjian Chen in Synthetic Biology (2024)

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    Protocol

    Ethanol Injection Method for Liposome Preparation

    Ethanol injection method is one of the preferred methods for liposome preparation due to its advantages including rapidity, safety, and reproducibility. This method involves the injection of phospholipid solut...

    Guangsheng Du, Xun Sun in Liposomes (2023)

  3. No Access

    Protocol

    Tracking Gut Motility in Organ and Cultures

    Gastrointestinal (GI) motility is a key component of digestive health, and it is complex, involving a multitude of cell types and mechanisms to drive both rhythmic and arrhythmic activity. Tracking GI motility...

    Peng Du, Vikram Joshi, Arthur Beyder in Cell Viability Assays (2023)

  4. No Access

    Protocol

    Large-Scale Expansion of Umbilical Cord Mesenchymal Stem Cells with Microcarrier Tablets in Bioreactor

    Mesenchymal stem cells show great potential in tissue engineering and cell-based therapies. This protocol demonstrates the use of 3D TableTrix® microcarrier tablets for large-scale manufacturing of human umbilica...

    Huanye Xu, Zhongxiao Cong, Yuanyuan Zhang, Wei Liu in Bioreactors in Stem Cell Biology (2022)

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    Protocol

    Bile Duct-on-a-Chip

    Cholangiopathies affect the biliary tree via various pathophysiological mechanisms. Research on biliary physiology and pathology, however, is hampered by a lack of physiologically relevant in vitro models. Con...

    Yu Du, William J. Polacheck, Rebecca G. Wells in Organ-on-a-Chip (2022)

  6. No Access

    Protocol

    Construction of Strong Promoters by Assembling Sigma Factor Binding Motifs

    Development of strong promoters is of growing interest in the field of biotechnology and synthetic biology. Here we present a protocol for the construction of strong prokaryotic promoters that can be recognize...

    Yonglin Zhang, Yang Wang, Jianghua Li, Chao Wang, Guocheng Du in Directed Evolution (2022)

  7. No Access

    Protocol

    Sample Preparation and Data Collection for Electron Crystallographic Studies on Membrane Protein Structures and Lipid–Protein Interaction

    Electron crystallography is a unique tool to study membrane protein structures and lipid–protein interactions in their native-like environments. Two-dimensional (2D) protein crystallization enables the lipids ...

    Ka-Yi Chan, Chloe Du Truong, Yu-** Poh, Po-Lin Chiu in cryoEM (2021)

  8. No Access

    Protocol

    Supply and Demand Analysis of Autophagy

    Autophagy is an intracellular protein degradation pathway that plays a vital role in cellular homeostasis. It maintains cellular function through proteostasis and the removal of unused and harmful proteins and...

    André du Toit, Ben Loos in Metabolic Flux Analysis in Eukaryotic Cells (2020)

  9. No Access

    Protocol

    Generating Goat Mammary Gland Bioreactors for Producing Recombinant Proteins by Gene Targeting

    Exogenous genes can be site-specifically integrated into the genomic DNA of animals by homologous recombination, generating transgenic animals. These animals have a clear hereditary background, although positi...

    Liyou An, Lan Yang, Yue** Huang, Yong Cheng, Fuliang Du in Microinjection (2019)

  10. No Access

    Protocol

    Generation of Conditional Knockout Mice by Sequential Insertion of Two loxP Sites In Cis Using CRISPR/Cas9 and Single-Stranded DNA Oligonucleotides

    Conditional knockout (cKO) mice are extremely valuable for biomedical research because they enable detailed analyses of gene functions in a tissue- or temporally-specific fashion. The conventional method for g...

    Ye Liu, Yubin Du, Wen **e, Fan Zhang, Douglas Forrest, Chengyu Liu in Microinjection (2019)

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    Protocol

    Chimeric Mouse Generation by ES Cell Blastocyst Microinjection and Uterine Transfer

    The ability to generate chimeric mice through microinjecting embryonic stem (ES) cells into blastocysts is a critical step for the conventional ES cell-mediated knockout technology. In recent years, designer n...

    Yubin Du, Wen **e, Fan Zhang, Chengyu Liu in Microinjection (2019)

  12. No Access

    Protocol

    Using CRISPR/Cas9 for Gene Knockout in Immunodeficient NSG Mice

    NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ (NSG) mice are an immunodeficient strain that enables human cell xenografts. However, NSG mice possess a complex genetic background that would complicate cross-breeding with other...

    Yubin Du, Wen **e, Fan Zhang, Uimook Choi, Chengyu Liu, Colin L. Sweeney in Microinjection (2019)

  13. No Access

    Protocol

    A Novel Colorimetric PCR-Based Biosensor for Detection and Quantification of Hepatitis B Virus

    Hepatitis B virus (HBV) can cause viral infection that attacks the liver and it is a major global health problem that puts people at a high risk of death from cirrhosis of the liver and liver cancer. HBV has i...

    Li Yang, Mei Li, Feng Du, Gangyi Chen, Afshan Yasmeen in Biosensors and Biodetection (2017)

  14. No Access

    Protocol

    A Light-Addressable Potentiometric Sensor for Odorant Detection Using Single Bioengineered Olfactory Sensory Neurons as Sensing Element

    A light-addressable potentiometric sensor (LAPS), a silicon-based surface potential detector, is combined with bioengineered olfactory sensory neurons (OSN) for odorant detection. A LAPS chip is used as a tran...

    Chunsheng Wu, Li** Du, Yulan Tian, ** Zhang, ** Wang in Biosensors and Biodetection (2017)

  15. No Access

    Protocol

    Customized Optimization of Metabolic Pathways by Combinatorial Transcriptional Engineering

    Introduction of a heterologous metabolic pathway into a platform microorganism for applications in metabolic engineering and synthetic biology is often technically straightforward. However, the major challenge...

    Yongbo Yuan, **g Du, Huimin Zhao in Systems Metabolic Engineering (2013)