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    Protocol

    TCID50 Assay: A Simple Method to Determine Baculovirus Titer

    There are many methods that can be used to determine the infectious titer of your baculovirus stock. The TCID50 method is a simple end-point dilution method that determines the amount of baculovirus virus needed ...

    Zhihui Zhang, **aoyue Zhang, Hongying Chen in Baculovirus (2024)

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    Protocol

    Production of Secreted Antibody in Baculovirus Expression Vector System

    Monoclonal antibodies have widespread applications in disease treatment and antigen detection. They are traditionally produced using mammalian cell expression system, which is not able to satisfy the increasin...

    Zhihui Zhang, **aoyue Zhang, Lulu Liu, Hongying Chen in Baculovirus (2024)

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    Protocol

    The Photothrombotic Model of Ischemic Stroke

    Stroke is a major cause of morbidity worldwide; yet, there is a lack of treatment options to address post-stroke cognitive and motor impairment, thus there is an urgency for develo** neuroprotective and rest...

    David E. Wong Zhang, Shenpeng R. Zhang, Hyun Ah. Kim, Christopher G. Sobey in Neurobiology (2024)

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    Protocol

    Split-Luciferase Complementation Imaging Assay in Virus–Plant Interactions

    Protein−protein interactions constitute the interface between a virus and the cell it infects and are crucial determinants of the outcome of the viral infection. Multiple techniques have been developed to stud...

    Huang Tan, ** Zhang, Rosa Lozano-Duran in Plant-Virus Interactions (2024)

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    Protocol

    Generation of Human Induced Pluripotent Stem Cells Using Episomal Vectors

    Human induced pluripotent stem cells (iPSCs) can be reprogrammed from differentiated somatic cells, such as adult fibroblasts and peripheral blood mononuclear cells, by introducing sets of defined factors. iPS...

    Sizhe Zhang, Yu Tang, Lu Shen in Human Induced Pluripotent Stem Cells (2024)

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    Protocol

    In Silico: Predicting Intrinsic Features of HLA Class-I Restricted Neoantigens

    Mutation-containing immunogenic peptides from tumor cells, also named as neoantigens, have various amino acid descriptors and physical-chemical properties characterized intrinsic features, which are useful in ...

    Ting Sun, Beibei **n, Yubo Fan, **g Zhang in HLA Ty** (2024)

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    Protocol

    Profiling Numerical and Structural Chromosomal Instability in Different Cancer Types

    Many cancers display whole chromosome instability (W-CIN) and structural chromosomal instability (S-CIN), referring to increased rates of acquiring numerically and structurally abnormal chromosome changes. Thi...

    **aoxiao Zhang, Maik Kschischo in Cancer Cytogenetics and Cytogenomics (2024)

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    Protocol

    N-Glycan Insertion for Probing Protein–Protein Interactions and Epitope Map**

    Introducing an N-linked glycosylation motif into recombinant proteins at specific sites is a useful tool in probing protein–protein interactions and epitope map**. Due to their large size, a new N-glycan can...

    Shayma Abukar, **aohan Zhang, Bertina Dragūnaitė, Gwladys Chabrier in Proteases and Cancer (2024)

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    Protocol

    Designing High Binding Affinity Peptides for MHC Class I Using MAM: An In Silico Approach

    The availability of extensive MHC-peptide binding data has boosted machine learning-based approaches for predicting binding affinity and identifying binding motifs. These computational tools leverage the wealt...

    Yu Wei Zhang in HLA Ty** (2024)

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    Protocol

    Wolbachia Transinfection Via Embryonic Microinjection

    The process of transferring Wolbachia from one species to another to establish a stable, maternally inherited infection in the target species is known as transinfection. The success of transinfection is primarily...

    Meichun Zhang, Zhiyong ** in Wolbachia (2024)

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    Protocol

    Evaluation of Oxygen Consumption Rates In Situ

    An analysis of the mitochondrial respiration function represented by the oxygen consumption rate is necessary to assess mitochondrial bioenergetics and redox function. This protocol describes two alternative t...

    Anqi Li, Yuan Qin, Ying Zhang, **aoqun Zhen, Guohua Gong in Hypoxia (2024)

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    Protocol

    Studying the Dynamics of Tunneling Tubes and Cellular Spheres

    Cancer cytogenetic analyses often involve cell culture. However, many cytogeneticists overlook interesting phenotypes associated with cultured cells. Given that cytogeneticists need to focus more on phenotypes...

    Sanjana Thanedar, Eric Heng, Donghong Ju in Cancer Cytogenetics and Cytogenomics (2024)

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    Protocol

    A Robust In Vitro Co-culture Model for Studying the Intercellular Communication of Neutrophils

    Communication among neutrophils plays critical roles during various phases of inflammatory responses, with clinical relevance to both acute and chronic inflammatory diseases. Despite its significance, underlyi...

    RuiCi Lin, Yao Zhang, Shuo Geng, Liwu Li in Immune Homeostasis (2024)

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    Protocol

    Isolation and Culture of Mouse Primary Microglia and Oligodendrocyte Precursor Cells

    Microglia and oligodendrocyte precursor cells (OPCs) are critical glia subsets in the central nervous system (CNS) and are actively engaged in a body of diseases, such as stroke, Alzheimer’s disease, multiple ...

    Zihao Li, Cun-** Zhang in Immune Homeostasis (2024)

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    Protocol

    Endothelial Mitochondria-Associated Membranes (MAMs) Isolation by Percoll Step Gradients

    Mitochondria-associated membranes (MAMs) are regions where the endoplasmic reticulum (ER) interacts with mitochondria and regulate lipid trafficking, calcium signaling, ER stress, and inflammation activation. ...

    Margaret Baldini, Cheng Zhang, Jun Yu in Immune Homeostasis (2024)

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    Protocol

    TurboID-Based Proximity Labeling: A Method to Decipher Protein–Protein Interactions in Plants

    Proteins form complex networks through interaction to drive biological processes. Thus, dissecting protein–protein interactions (PPIs) is essential for interpreting cellular processes. To overcome the drawback...

    Yuanyuan Li, Yongliang Zhang, Savithramma P. Dinesh-Kumar in Plant-Virus Interactions (2024)

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    Protocol

    Immunophenoty**, Part II: Analysis of Nanoparticle Effects on the Composition and Activation Status of Human Peripheral Blood Mononuclear Cells

    The use of nanoparticles as drug delivery carriers requires analysis of their safety, which among other tests, includes immunotoxicity. Nanoparticles are also increasingly used for applications intended to spe...

    Hannah S. Newton, Jenny Zhang in Characterization of Nanoparticles Intended… (2024)

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    Protocol

    Gene Editing and Reprogramming of Human Fibroblast Cells to Human Induced Pluripotent Stem Cells

    Predictive disease models play significant roles in advancing our knowledge of the pathology of human disease. In this field, animal models have been extensively employed and have provided crucial insights int...

    Zhe Zhang, Shinghua Ding in Human Induced Pluripotent Stem Cells (2024)

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    Protocol

    T Cell Subsets and Immune Homeostasis

    T cells are a heterogeneous group of cells that can be classified into different subtypes according to different classification methods. The body’s immune system has a highly complex and effective regulatory n...

    Chuyu Wu, Mei-Ling Jiang, Tao Pang, Cun-** Zhang in Immune Homeostasis (2024)

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    Protocol

    Immunophenoty**, Part I: Instrument Calibration and Reagent Qualification for Immunophenoty** Analysis of Human Peripheral Blood Mononuclear Cell Cultures

    Nanoparticles are increasingly used in biomedical applications to influence the way the immune system reacts to tumors and infectious disease-causing agents. Nanoparticles not-intended for immunomodulation can...

    Hannah S. Newton, Jenny Zhang in Characterization of Nanoparticles Intended… (2024)

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