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    Protocol

    In Vivo cII, gpt, and Spi Gene Mutation Assays in Transgenic Mice and Rats

    Transgenic mutation assays are used to identify and characterize genotoxic hazards and for determining the mode of action for carcinogens. The three most popular transgenic mutational models are Big Blue® (rats o...

    Mugimane G. Manjanatha, Xuefei Cao, Sharon D. Shelton in Genotoxicity Assessment (2013)

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    Array-Based Immunoassays with Rolling-Circle Amplification Detection

    This chapter describes methods for the use of antibody microarrays with rolling-circle amplification (RCA). The methods are divided into three sections. The first section covers antibody preparation and microa...

    Katie Partyka, Shuangshuang Wang, ** Zhao, Brian Cao in Molecular Toxicology Protocols (2014)

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    Detection of Pig-a Mutant Erythrocytes in the Peripheral Blood of Rats and Mice

    The endogenous X-linked phosphatidyl inositol glycan class A gene (Pig-a) can be used as a reporter of in vivo somatic cell mutation in rats and mice. Pig-a mutant cells are deficient in specific protein surface ...

    Vasily N. Dobrovolsky, Xuefei Cao, Javed A. Bhalli in Molecular Toxicology Protocols (2014)

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    Protocol

    Common Methods Used for the Discovery of Natural Anticancer Compounds

    Carcinogenesis is a long-term, multifactorial, and multistep process. Dietary phytochemicals can play a significant role in cancer prevention. In this chapter, we describe common protocols to study the role of...

    Min Tang, **nfang Yu, Yiqun Jiang, Ying Shi, **aolan Liu, Wei Li in Cancer Prevention (2014)

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    Evaluation of Protein–Ligand Docking by Cyscore

    Protein–ligand docking is a powerful method in drug discovery. The reliability of docking can be quantified by RMSD between a docking structure and an experimentally determined one. However, most experimentall...

    Yang Cao, Wentao Dai, Zhichao Miao in Computational Drug Discovery and Design (2018)

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    Protocol

    Detection of Pig-a Mutant Erythrocytes in the Peripheral Blood of Rats and Mice

    The endogenous X-linked phosphatidyl inositol glycan class A gene (Pig-a) can be used as a reporter of in vivo somatic cell mutation in rats and mice. Pig-a mutant cells are deficient in specific protein surface ...

    Vasily N. Dobrovolsky, Xuefei Cao, Javed A. Bhalli in Molecular Toxicology Protocols (2020)

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    Protocol

    Protein–Ligand Blind Docking Using CB-Dock2

    Protein–ligand blind docking is a widely used method for studying the binding sites and poses of ligands and receptors in pharmaceutical and biological research. Recently, our new blind docking server named CB...

    Yang Liu, Yang Cao in Computational Drug Discovery and Design (2024)