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  1. Article

    Editorial Expression of Concern: The threshold pattern of calcineurin-dependent gene expression is altered by loss of the endogenous inhibitor calcipressin

    Sandra Ryeom, Rebecca. J Greenwald, Arlene. H Sharpe, Frank McKeon in Nature Immunology (2024)

  2. No Access

    Article

    X-CHIME enables combinatorial, inducible, lineage-specific and sequential knockout of genes in the immune system

    Annotation of immunologic gene function in vivo typically requires the generation of knockout mice, which is time consuming and low throughput. We previously developed CHimeric IMmune Editing (CHIME), a CRISPR...

    Martin W. LaFleur, Ashlyn M. Lemmen, Ivy S. L. Streeter in Nature Immunology (2024)

  3. Article

    Open Access

    Microbiota-dependent regulation of costimulatory and coinhibitory pathways via innate immune sensors and implications for immunotherapy

    Our bodies are inhabited by trillions of microorganisms. The host immune system constantly interacts with the microbiota in barrier organs, including the intestines. Over decades, numerous studies have shown t...

    Joon Seok Park, Francesca S. Gazzaniga in Experimental & Molecular Medicine (2023)

  4. No Access

    Article

    B-cell-specific checkpoint molecules that regulate anti-tumour immunity

    The role of B cells in anti-tumour immunity is still debated and, accordingly, immunotherapies have focused on targeting T and natural killer cells to inhibit tumour growth1,2. Here, using high-throughput flow cy...

    Lloyd Bod, Yoon-Chul Kye, **gwen Shi, Elena Torlai Triglia, Alexandra Schnell in Nature (2023)

  5. Article

    Publisher Correction: Targeting PD-L2–RGMb overcomes microbiome-related immunotherapy resistance

    Joon Seok Park, Francesca S. Gazzaniga, Meng Wu, Amalia K. Luthens, Jacob Gillis in Nature (2023)

  6. No Access

    Article

    Targeting PD-L2–RGMb overcomes microbiome-related immunotherapy resistance

    The gut microbiota is a crucial regulator of anti-tumour immunity during immune checkpoint inhibitor therapy. Several bacteria that promote an anti-tumour response to immune checkpoint inhibitors have been ide...

    Joon Seok Park, Francesca S. Gazzaniga, Meng Wu, Amalia K. Luthens, Jacob Gillis in Nature (2023)

  7. No Access

    Article

    PD-1 combination therapy with IL-2 modifies CD8+ T cell exhaustion program

    Combination therapy with PD-1 blockade and IL-2 is highly effective during chronic lymphocytic choriomeningitis virus infection1. Here we examine the underlying basis for this synergy. We show that PD-1 + IL-2 co...

    Masao Hashimoto, Koichi Araki, Maria A. Cardenas, Peng Li, Rohit R. Jadhav in Nature (2022)

  8. Article

    Open Access

    PD-L2 controls peripherally induced regulatory T cells by maintaining metabolic activity and Foxp3 stability

    Regulatory T (Treg) cells are central to limit immune responses to allergens. Here we show that PD-L2 deficiency prevents the induction of tolerance to ovalbumin and control of airway hyperreactivity, in parti...

    Benjamin P. Hurrell, Doumet Georges Helou, Emily Howard in Nature Communications (2022)

  9. Article

    Open Access

    Gata6+ resident peritoneal macrophages promote the growth of liver metastasis

    Emerging evidence suggests that resident macrophages within tissues are enablers of tumor growth. However, a second population of resident macrophages surrounds all visceral organs within the cavities and noth...

    Mokarram Hossain, Raymond Shim, Woo-Yong Lee, Arlene H. Sharpe in Nature Communications (2022)

  10. No Access

    Article

    PD-L1–PD-1 interactions limit effector regulatory T cell populations at homeostasis and during infection

    Phenotypic and transcriptional profiling of regulatory T (Treg) cells at homeostasis reveals that T cell receptor activation promotes Treg cells with an effector phenotype (eTreg) characterized by the production ...

    Joseph A. Perry, Lindsey Shallberg, Joseph T. Clark in Nature Immunology (2022)

  11. No Access

    Article

    Repertoire analyses reveal T cell antigen receptor sequence features that influence T cell fate

    T cells acquire a regulatory phenotype when their T cell antigen receptors (TCRs) experience an intermediate- to high-affinity interaction with a self-peptide presented via the major histocompatibility complex...

    Kaitlyn A. Lagattuta, Joyce B. Kang, Aparna Nathan, Kristen E. Pauken in Nature Immunology (2022)

  12. Article

    Not-so-opposite ends of the spectrum: CD8+ T cell dysfunction across chronic infection, cancer and autoimmunity

    CD8+ T cells are critical mediators of cytotoxic effector function in infection, cancer and autoimmunity. In cancer and chronic viral infection, CD8+ T cells undergo a progressive loss of cytokine production and ...

    Jenna L. Collier, Sarah A. Weiss, Kristen E. Pauken, Debattama R. Sen in Nature Immunology (2021)

  13. Article

    Open Access

    PD-1 pathway regulates ILC2 metabolism and PD-1 agonist treatment ameliorates airway hyperreactivity

    Allergic asthma is a leading chronic disease associated with airway hyperreactivity (AHR). Type-2 innate lymphoid cells (ILC2s) are a potent source of T-helper 2 (Th2) cytokines that promote AHR and lung infla...

    Doumet Georges Helou, Pedram Shafiei-Jahani, Richard Lo in Nature Communications (2020)

  14. No Access

    Article

    Interplay of somatic alterations and immune infiltration modulates response to PD-1 blockade in advanced clear cell renal cell carcinoma

    PD-1 blockade has transformed the management of advanced clear cell renal cell carcinoma (ccRCC), but the drivers and resistors of the PD-1 response remain incompletely elucidated. Here, we analyzed 592 tumors...

    David A. Braun, Yue Hou, Ziad Bakouny, Miriam Ficial in Nature Medicine (2020)

  15. No Access

    Article

    Prevention of CAR-T-cell dysfunction

    The overexpression of the transcription factor c-Jun improves chimeric-antigen-receptor T-cell functionality and enhances the killing of low-antigen-expressing liquid and solid cancers in mice.

    Martin W. LaFleur, Brian C. Miller, Arlene H. Sharpe in Nature Biomedical Engineering (2020)

  16. No Access

    Article

    Fibroblastic reticular cells enhance T cell metabolism and survival via epigenetic remodeling

    Lymph node fibroblastic reticular cells (FRCs) respond to signals from activated T cells by releasing nitric oxide, which inhibits T cell proliferation and restricts the size of the expanding T cell pool. Whet...

    Flavian D. Brown, Debattama R. Sen, Martin W. LaFleur, Jernej Godec in Nature Immunology (2019)

  17. Article

    Author Correction: Subsets of exhausted CD8+ T cells differentially mediate tumor control and respond to checkpoint blockade

    An amendment to this paper has been published and can be accessed via a link at the top of the paper.

    Brian C. Miller, Debattama R. Sen, Rose Al Abosy, Kevin Bi in Nature Immunology (2019)

  18. No Access

    Article

    Defining ‘T cell exhaustion’

    ‘T cell exhaustion’ is a broad term that has been used to describe the response of T cells to chronic antigen stimulation, first in the setting of chronic viral infection but more recently in response to tumou...

    Christian U. Blank, W. Nicholas Haining, Werner Held in Nature Reviews Immunology (2019)

  19. No Access

    Article

    Follicular regulatory T cells control humoral and allergic immunity by restraining early B cell responses

    Follicular regulatory T (TFR) cells have specialized roles in modulating follicular helper T (TFH) cell activation of B cells. However, the precise role of TFR cells in controlling antibody responses to foreign a...

    Rachel L. Clement, Joe Daccache, Mostafa T. Mohammed, Alos Diallo in Nature Immunology (2019)

  20. No Access

    Article

    PTPN2 regulates the generation of exhausted CD8+ T cell subpopulations and restrains tumor immunity

    CD8+ T cell exhaustion is a state of dysfunction acquired in chronic viral infection and cancer, characterized by the formation of Slamf6+ progenitor exhausted and Tim-3+ terminally exhausted subpopulations throu...

    Martin W. LaFleur, Thao H. Nguyen, Matthew A. Coxe, Brian C. Miller in Nature Immunology (2019)

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