Log in

Cloning, heterologous expression, and comparative characterization of a mesophilic α-amylase gene from Bacillus subtilis JN16 in Escherichia coli

  • Original Article
  • Published:
Annals of Microbiology Aims and scope Submit manuscript

Abstract

A gene encoding mesophilic α-amylase from Bacillus subtilis JN16 was identified and designated as AmyQ. The AmyQ gene was cloned, sequenced, and expressed in Escherichia coli. AmyQ is 1,980 bp in length and encodes a protein of 660 amino acids. AmyQ was cloned in plasmid pET20b (+) on an NcoI–BamHI fragment, and used to transform competent E. coli amylase-negative cells (BL21); ampicillin-resistant transformants were screened for the production of α-amylase. The recombinant α-amylase encoded in E. coli was designated AmyQ A, and α-amylase from wild-type B. subtilis strain JN16 was designated AmyQ B. AmyQ A was characterized biochemically and showed maximal activity at pH 7.0 and maximal stability at pH 5.5; the optimum temperature for enzymatic activity was close to 70°C. The optimal pH for purified AmyQ B was 7.5. With soluble starch as substrate, the K m and V max of AmyQ A were 3.40 g/L and 15.70 g/(L min−1), respectively, and the K m and V max of AmyQ B were 2.01 g/L and 6.95 g/(L min−1), respectively. The activity of AmyQ A was enhanced by K+, Mn2+, Co2+ and Ca2+, and the activity of AmyQ B was enhanced in the presence of K+, Co2+ and Ca2+.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
EUR 32.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or Ebook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price includes VAT (France)

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Abe A, Yoshida H, Tonozuka T, Sakano Y, Kamitori S (2005) Complexes of Thermoactinomyces vulgaris R-47 α-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with α-(1, 6) glycosidic linkages. FEBS J 272:6145–6153

    Article  PubMed  CAS  Google Scholar 

  • Ahmadia A, Ghobadia S, Khajehb K, Nomanpourc B, Dalfardb AB (2010) Purification of α-amylase from Bacillus sp. GHA1 and its partial characterization. J Iran Chem Soc 7:432–440

    Article  Google Scholar 

  • Asther M, Meunier JC (1990) Increased thermal stability of Bacillus licheniformis [alpha]-amylase in the presence of various additives. Enzyme Microb Technol 12:902–905

    Article  CAS  Google Scholar 

  • Besemer J, Borodovsky M (1999) Heuristic approach to deriving models for gene finding. Nucleic Acids Res 27:3911–3920

    Article  PubMed  CAS  Google Scholar 

  • Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248–254

    Article  PubMed  CAS  Google Scholar 

  • Buisson G, Duee E, Haser R, Payan F (1987) Three dimensional structure of porcine pancreatic alpha-amylase at 2.9 Å resolution. Role of calcium in structure and activity. EMBO J 6:3909

    PubMed  CAS  Google Scholar 

  • Clark D, Kelly R (1990) Hot bacteria. Chemtech 20:554–562

    Google Scholar 

  • Dong G, Vieille C, Savchenko A, Zeikus JG (1997) Cloning, sequencing, and expression of the gene encoding extracellular alpha-amylase from Pyrococcus furiosus and biochemical characterization of the recombinant enzyme. Appl Environ Microbiol 63:3569–3576

    PubMed  CAS  Google Scholar 

  • Fukusumi S, Kamizono A, Horinouchi S, Beppu T (1988) Cloning and nucleotide sequence of a heat stable amylase gene from an anaerobic thermophile, Dictyoglomus thermophilum. Eur J Biochem 174:15–21

    Article  PubMed  CAS  Google Scholar 

  • Fuwa H (1954) A new method for microdetermination of amylase activity by the use of amylose as the substrate. J Biochem 41:583–603

    CAS  Google Scholar 

  • Gupta R, Gigras P, Mohapatra H, Goswami VK, Chauhan B (2003) Microbial [alpha]-amylases: a biotechnological perspective. Process Biochem 38:1599–1616

    Article  CAS  Google Scholar 

  • Igarashi K, Hatada Y, Ikawa K, Araki H, Ozawa T, Kobayashi T, Ozaki K, Ito S (1998) Improved thermostability of a Bacillus alpha-amylase by deletion of an arginine-glycine residue is caused by enhanced calcium binding. Biochem Biophys Res Commun 248:372–377

    Article  PubMed  CAS  Google Scholar 

  • Igarashi K, Ozawa T, Ikawa-Kitayama K, Hayashi Y, Araki H, Endo K, Hagihara H, Ozaki K (1999) Thermostabilization by proline substitution in an alkaline, liquefying α-amylase from Bacillus sp. strain KSM-1378. Biosci Biotechnol Biochem 63:1535–1540

    Article  PubMed  CAS  Google Scholar 

  • Jespersen HM, Ann MacGregor E, Henrissat B, Sierks MR, Svensson B (1993) Starch-and glycogen-debranching and branching enzymes: prediction of structural features of the catalytic (β/α) 8-barrel domain and evolutionary relationship to other amylolytic enzymes. J Protein Chem 12:791–805

    Article  PubMed  CAS  Google Scholar 

  • Khajeh K, Nemat-Gorgani M (2001) Comparative studies on a mesophilic and a thermophilic α-amylase. Appl Biochem Biotechnol 90:47–55

    Article  PubMed  CAS  Google Scholar 

  • Kumar S, Tamura K, Nei M (1994) MEGA: molecular evolutionary genetics analysis software for microcomputers. Comput Appl Biosci: CABIOS 10:189–191

    PubMed  CAS  Google Scholar 

  • Lin LL, Huang CC, Lo HF (2008) Impact of Arg210-Ser211 deletion on thermostability of a truncated Bacillus sp. strain TS-23 α-amylase. Process Biochem 43:559–565

    Article  CAS  Google Scholar 

  • Lineweaver H, Burk D (1934) The determination of enzyme dissociation constants. J Am Chem Soc 56:658–666

    Article  CAS  Google Scholar 

  • Ludlow JM, Clark DS (1991) Engineering considerations for the application of extremophiles in biotechnology. Rev Biotechnol 10:321–345

    Article  CAS  Google Scholar 

  • Nielsen JE, Borchert TV (2000) Protein engineering of bacterial [alpha]-amylases. Struct Mol Enzymol 1543:253–274

    Article  CAS  Google Scholar 

  • Richèle DW, Joost CMU, Reinetta MB, Bauke WD, Lubbert D (1998) Engineering of cyclodextrin product specificity and pH optima of the thermostable cyclodextrin glycosyltransferase from thermoanaerobacterium thermosulfurigenes EM1. J Biol Chem 273:5771–5779

    Article  Google Scholar 

  • Sajedi RH, Taghdir M, Naderi-Manesh H, Khajeh K, Ranjbar B (2007) Nucleotide sequence, structural investigation and homology modeling studies of a Ca2+-independent α-amylase with zcidic pH-profile. J Biochem Mol Biol 40:315–324

    Article  PubMed  CAS  Google Scholar 

  • Thompson J, Higgins DG (1994) Clustal W: improving the sensitivity of the progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680

    Article  PubMed  CAS  Google Scholar 

  • Tomizawa H, Yamada H, Wada K, Imoto T (1995a) Stabilization of lysozyme against irreversible inactivation by suppression of chemical reactions. J Biochem 117:635–640

    Article  PubMed  CAS  Google Scholar 

  • Tomizawa H, Yamada H, Hashimoto Y, Imoto T (1995b) Stabilization of lysozyme against irreversible inactivation by alterations of the Asp-Gly sequences. Protein Eng 8:1023–1028

    Article  PubMed  CAS  Google Scholar 

  • Vieille C, Burdette DS, Zeikus JG (1996) Thermozymes. Biotechnol Annu Rev 2:1–83

    Article  PubMed  CAS  Google Scholar 

  • Violet M, Meunier JC (1989) Kinetic study of the irreversible thermal denaturation of Bacillus licheniformis alpha-amylase. Biochem J 263:665–670

    PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported financially by the Priority Academic Program Development of Jiangsu Higher Education Institutions, the National Natural Science Foundation of China (20836003), the Major State Basic Research Development Program of China (973 Program, 2012CB720806), and the National High Technology Research and Development Program of China (863 Program, 2011AA100905), and 111 Project (111-2-06).

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Long Liu or Guocheng Du.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Yang, H., Liu, L., Li, J. et al. Cloning, heterologous expression, and comparative characterization of a mesophilic α-amylase gene from Bacillus subtilis JN16 in Escherichia coli . Ann Microbiol 62, 1219–1226 (2012). https://doi.org/10.1007/s13213-011-0364-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s13213-011-0364-9

Keywords

Navigation