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Abundance Calculation of Ciliates from Soil
As ciliates cannot directly be extracted from the soil, abundance of ciliates requires culturing them followed by enumeration by variety of methods....
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Abundance and Variety
Seventeenth-century “mechanical philosophy”, particularly its Cartesian form, challenged the long-standing belief in final causes as explanatory...
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Higher rat abundance in greener urban areas
Urban greening has become an increasingly popular strategy to improve urban life and human health. However, there are indications that the presence...
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Agent-based simulations improve abundance estimation
Abundance is a fundamental characteristic of every biological population and is the focus of many research programs in ecology and conservation. In...
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Unveiling global species abundance distributions
Whether most species are rare or have some intermediate abundance is a long-standing question in ecology. Here, we use more than one billion...
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Differential Abundance Analysis of Microbiome Data
Differential abundance analysis (DDA) is an active area in microbiome research. The main goal of DDA is to identify features (i.e., OTUs, ASVs, taxa,...
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Zooplankton of Volga River Reservoirs: Structure, Abundance and Dynamics
AbstractThe taxonomic structure and spatial distribution of the late-summer zooplankton in the Volga River from the upper Ivankovo Reservoir to the...
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Characterizing glucokinase variant mechanisms using a multiplexed abundance assay
BackgroundAmino acid substitutions can perturb protein activity in multiple ways. Understanding their mechanistic basis may pinpoint how residues...
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Introduced competitor reduces abundance of an imperiled cottontail
Introduced species competing with native species can decrease the density and abundance of native species, causing concern for the persistence of...
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Abundance Calculation of Naked and Testate Amoebae from Soil
Protists in soil perform important functions in the decomposer cycle and plant growth and are valued bioindicators for natural and anthropogenic...
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Bayesian N-Mixture Models Applied to Estimating Insect Abundance
Estimating animal abundance is an area of interest for many conservationists and population ecologists. When using count data to obtain abundance...
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Neotropical Mammals and the Analysis of Occupancy and Abundance
Ecology has to do with the number of individuals or species in a biological population or community. Historically, the estimation of population size...
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Abundance estimation of plains zebras via search–encounter sampling
Spatial capture–recapture (SCR) using search–encounter methods estimate population abundance from encounters of individually recognisable animals...
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Urban development reduces bee abundance and diversity
Wild bee communities persist in cities despite major disruption of nesting and food resources by urban development. Bee diversity and abundance is...
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ScLinear predicts protein abundance at single-cell resolution
Single-cell multi-omics have transformed biomedical research and present exciting machine learning opportunities. We present scLinear, a linear...
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Extraction optimisation to measure viral abundance in red soils
Viruses are extremely abundant in soils and have various important ecological implications therein. The quantification and identification of soil...
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Abundance Calculation of Mycophagous Amoebae
Mycophagous protists occur in most soils, but their proper counting methods are lacking. As reported in the literature, mycophagous amoebae can be...
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Balancing lysosome abundance in health and disease
Lysosomes are catabolic organelles that govern numerous cellular processes, including macromolecule degradation, nutrient signalling and ion...
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Occupancy, Abundance, and Related Topics
Models for occupancy, where it is important to determine whether a particular species is present or not, have a long history. The literature is very...
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Modeling habitat suitability across different levels of invasive plant abundance
Predicting where invasive plants are likely to spread and become abundant is critical for informing invasive plant management. Species distribution...
