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  1. Article

    Open Access

    Taxonomic characterisation of the Regianum clade (genus Tuber) and the trait evolution of spore size among true truffles

    The genus Tuber comprises ectomycorrhizal fungal species producing belowground ascomata, including the gastronomically most prominent hypogeous fungi. Since the discovery and description of new species are ongoin...

    Péter Cseh, Zsolt Merényi, Lilla Bóna, Torda Varga, Károly Bóka in Mycological Progress (2024)

  2. Article

    Open Access

    ContScout: sensitive detection and removal of contamination from annotated genomes

    Contamination of genomes is an increasingly recognized problem affecting several downstream applications, from comparative evolutionary genomics to metagenomics. Here we introduce ContScout, a precise tool for...

    Balázs Bálint, Zsolt Merényi, Botond Hegedüs, Igor V. Grigoriev in Nature Communications (2024)

  3. No Access

    Article

    Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria

    The fungal genus Armillaria contains necrotrophic pathogens and some of the largest terrestrial organisms that cause tremendous losses in diverse ecosystems, yet how they evolved pathogenicity in a clade of domin...

    Neha Sahu, Boris Indic, Johanna Wong-Bajracharya, Zsolt Merényi in Nature Microbiology (2023)

  4. Article

    Open Access

    Genomes of fungi and relatives reveal delayed loss of ancestral gene families and evolution of key fungal traits

    Fungi are ecologically important heterotrophs that have radiated into most niches on Earth and fulfil key ecological services. Despite intense interest in their origins, major genomic trends of their evolution...

    Zsolt Merényi, Krisztina Krizsán, Neha Sahu, **ao-Bin Liu in Nature Ecology & Evolution (2023)

  5. Article

    Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa

    This article is the 13th contribution in the Fungal Diversity Notes series, wherein 125 taxa from four phyla, ten classes, 31 orders, 69 families, 92 genera and three genera incertae sedis are treated, demonstrat...

    Saranyaphat Boonmee, Dhanushka N. Wanasinghe, Mark S. Calabon in Fungal Diversity (2021)

  6. Article

    Open Access

    Revealing hidden drivers of macrofungal species richness by analyzing fungal guilds in temperate forests, West Hungary

    We explored the most influential stand-scaled drivers of ectomycorrhizal, terricolous saprotrophic, and wood-inhabiting (main functional groups) macrofungal species richness in mixed forests by applying regres...

    Gergely Kutszegi, Irén Siller, Bálint Dima, Zsolt Merényi, Torda Varga in Community Ecology (2021)

  7. Article

    Open Access

    Comparative genomics reveals the origin of fungal hyphae and multicellularity

    Hyphae represent a hallmark structure of multicellular fungi. The evolutionary origins of hyphae and of the underlying genes are, however, hardly known. By systematically analyzing 72 complete genomes, we here...

    Enikő Kiss, Botond Hegedüs, Máté Virágh, Torda Varga in Nature Communications (2019)

  8. No Access

    Article

    Challenges in the delimitation of morphologically similar species: a case study of Tuber brumale agg. (Ascomycota, Pezizales)

    Tuber brumale (winter truffle) is one of the most controversial true truffles, not only in regard to its ecological and economical role but also its taxonomy. Multilocus phylogenetic anal...

    Zsolt Merényi, Torda Varga, András G. Hubai, Péter Pitlik in Mycological Progress (2017)

  9. No Access

    Chapter

    Tuber brumale: A Controversial Tuber Species

    Tuber brumale is one of the most controversial and most studied Tuber species. Though they are excellently organoleptic and consequently have gastronomic and economic value, they are considered to have a contami...

    Zsolt Merényi, Torda Varga, Zoltán Bratek in True Truffle (Tuber spp.) in the World (2016)

  10. No Access

    Article

    Phylogeny and phylogeography of the Tuber brumale aggr.

    The Tuber brumale (winter truffle) is a black truffle reported from most European countries, belonging to the Melanosporum group. Its significance in the economy is ambivalent as the winter truffle has been shown...

    Zsolt Merényi, Torda Varga, József Geml, Ákos Kund Orczán, Gerard Chevalier in Mycorrhiza (2014)