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Open AccessTaxonomic characterisation of the Regianum clade (genus Tuber) and the trait evolution of spore size among true truffles
The genus Tuber comprises ectomycorrhizal fungal species producing belowground ascomata, including the gastronomically most prominent hypogeous fungi. Since the discovery and description of new species are ongoin...
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Article
Open AccessContScout: sensitive detection and removal of contamination from annotated genomes
Contamination of genomes is an increasingly recognized problem affecting several downstream applications, from comparative evolutionary genomics to metagenomics. Here we introduce ContScout, a precise tool for...
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Article
Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
The fungal genus Armillaria contains necrotrophic pathogens and some of the largest terrestrial organisms that cause tremendous losses in diverse ecosystems, yet how they evolved pathogenicity in a clade of domin...
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Article
Open AccessGenomes of fungi and relatives reveal delayed loss of ancestral gene families and evolution of key fungal traits
Fungi are ecologically important heterotrophs that have radiated into most niches on Earth and fulfil key ecological services. Despite intense interest in their origins, major genomic trends of their evolution...
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Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa
This article is the 13th contribution in the Fungal Diversity Notes series, wherein 125 taxa from four phyla, ten classes, 31 orders, 69 families, 92 genera and three genera incertae sedis are treated, demonstrat...
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Open AccessRevealing hidden drivers of macrofungal species richness by analyzing fungal guilds in temperate forests, West Hungary
We explored the most influential stand-scaled drivers of ectomycorrhizal, terricolous saprotrophic, and wood-inhabiting (main functional groups) macrofungal species richness in mixed forests by applying regres...
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Article
Open AccessComparative genomics reveals the origin of fungal hyphae and multicellularity
Hyphae represent a hallmark structure of multicellular fungi. The evolutionary origins of hyphae and of the underlying genes are, however, hardly known. By systematically analyzing 72 complete genomes, we here...
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Article
Challenges in the delimitation of morphologically similar species: a case study of Tuber brumale agg. (Ascomycota, Pezizales)
Tuber brumale (winter truffle) is one of the most controversial true truffles, not only in regard to its ecological and economical role but also its taxonomy. Multilocus phylogenetic anal...
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Tuber brumale: A Controversial Tuber Species
Tuber brumale is one of the most controversial and most studied Tuber species. Though they are excellently organoleptic and consequently have gastronomic and economic value, they are considered to have a contami...
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Article
Phylogeny and phylogeography of the Tuber brumale aggr.
The Tuber brumale (winter truffle) is a black truffle reported from most European countries, belonging to the Melanosporum group. Its significance in the economy is ambivalent as the winter truffle has been shown...