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Article
Open AccessGINv2.0: a comprehensive topological network integrating molecular interactions from multiple knowledge bases
Knowledge bases have been instrumental in advancing biological research, facilitating pathway analysis and data visualization, which are now widely employed in the scientific community. Despite the establishme...
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Article
Open AccessInsulin-like growth factor-binding protein-7 (IGFBP7) links senescence to heart failure
Heart failure (HF) is a rising global cardiovascular epidemic driven by aging and chronic inflammation. As elderly populations continue to increase, precision treatments for age-related cardiac decline are urg...
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Article
Open AccessThe global integrative network: integration of signaling and metabolic pathways
The crosstalk between signaling and metabolic pathways has been known to play key roles in human diseases and plant biological processes. The integration of signaling and metabolic pathways can provide an esse...
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Chapter and Conference Paper
MVSTER: Epipolar Transformer for Efficient Multi-view Stereo
Learning-based Multi-View Stereo (MVS) methods warp source images into the reference camera frustum to form 3D volumes, which are fused as a cost volume to be regularized by subsequent networks. The fusing ste...
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Protocol
Applications of Oxford Nanopore Sequencing in Schizosaccharomyces pombe
Recent years have seen great progresses in third-generation sequencing. New commercial platforms from Oxford Nanopore Technologies (ONT) can generate ultra-long reads from single-molecule nucleic acid fragment...
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Article
Open AccessAnalysing the meta-interaction between pathways by gene set topological impact analysis
Pathway analysis is widely applied in transcriptome analysis. Given certain transcriptomic changes, current pathway analysis tools tend to search for the most impacted pathways, which provides insight into und...
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Chapter and Conference Paper
Predicting the Evolution of Service Value Features from User Reviews for Continuous Service Improvement
Facing with a highly competitive service market where customers have more choices on services to fulfill their demands, service providers have to improve their services continuously to make them adapt to const...
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Chapter and Conference Paper
Studying Social Collaboration Features and Patterns in Service Crowdsourcing
Service crowdsourcing follows typical social collaboration processes with stochastic and dynamic characteristics. In this paper, the “bug-fix” social collaboration on GitHub is used as a case scenario of crowd...
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Article
Quantifying and analyzing neighborhood configuration characteristics to cellular automata for land use simulation considering data source error
Cellular Automata (CA) simulation models have been increasingly used in land use studies. However, neighborhood configuration, an essential element of CA model, remarkably impacts the accuracy of simulated res...
