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  1. No Access

    Article

    C9orf72 controls hepatic lipid metabolism by regulating SREBP1 transport

    Sterol regulatory element binding transcription factors (SREBPs) play a crucial role in lipid homeostasis. They are processed and transported to the nucleus via COPII, where they induce the expression of lipog...

    Yachen Wu, Wenzhong Zheng, Guofeng Xu, Lijun Zhu in Cell Death & Differentiation (2024)

  2. Article

    Open Access

    Comparative study of melasma in patients before and after treatment based on lipomics

    Skin barrier alterations play a crucial function in melasma development. Past researches have demonstrated variations in lipid content between the epidermis of melasma lesions and normal tissues, along with th...

    Yuan Zhu, **hui Xu, **uzu Song, Wenzhong **ang in Lipids in Health and Disease (2024)

  3. No Access

    Article

    Improving Sedum plumbizincicola genetic transformation with the SpGRF4–SpGIF1 gene and the self-excision CRE/LoxP system

    S. plumbizincicola genetic transformation was optimized using a self-excision molecular-assisted transformation system by integrating the SpGRF4/SpGIF1 gene with XVE and Cre/loxP.

    Yixin Zhang, Yanlan Mo, Hongxu Ren, **aotong Wu, Liyuan Han, Zhenyuan Sun in Planta (2024)

  4. No Access

    Article

    Targeting lncRNA16 by GalNAc-siRNA conjugates facilitates chemotherapeutic sensibilization via the HBB/NDUFAF5/ROS pathway

    Chemoresistance is a significant barrier to effective cancer treatment. Potential mechanisms for chemoresistance include reactive oxygen species (ROS) accumulation and expression of chemoresistance-promoting g...

    Yanfang Liu, Yan Wang, Bing Liu, Wenzhong Liu, Yuanyuan Ma in Science China Life Sciences (2024)

  5. No Access

    Article

    Combined Organic Fertilizer and Straw Return Enhanced Summer Maize Productivity and Optimized Soil Nitrate–N distribution in Rainfed Summer Maize–Winter Wheat Rotation on the Southeast Loess Plateau

    Organic fertilizer and straw return are sustainable measures for increasing crop yield and improving the soil environment. The present study investigated the effects of combined organic fertilizer and straw re...

    Kainan Zhao, Ming Huang, Youjun Li in Journal of Soil Science and Plant Nutrition (2023)

  6. No Access

    Article

    Functional identification of anthocyanin glucosyltransferase genes: a Ps3GT catalyzes pelargonidin to pelargonidin 3-O-glucoside painting the vivid red flower color of Paeonia

    Glycosylation from an anthocyanidin 3-O-glucosyltransferase Ps3GT (PsUGT78A27) facilitates the accumulation of pelargonidin 3-O-glucoside, which defines the vivid red flower color and occurs only in specific peon...

    Qianyu Wang, ** Zhu, Bing Li, Shanshan Li, Yong Yang, Qingyun Wang, Wenzhong Xu in Planta (2023)

  7. Article

    Open Access

    Cuproptosis-related lncRNA signature for prognostic prediction in patients with acute myeloid leukemia

    Long non-coding RNAs (lncRNAs) have been reported to have a crucial impact on the pathogenesis of acute myeloid leukemia (AML). Cuproptosis, a copper-triggered modality of mitochondrial cell death, might serve...

    Yidong Zhu, Jun He, Zihua Li, Wenzhong Yang in BMC Bioinformatics (2023)

  8. No Access

    Article

    Identification and Exploration of Serine Peptidase Inhibitor Kazal Type I (SPINK1) as a Potential Biomarker Correlated with the Progression of Non-Small Cell Lung Cancer

    Non-small cell lung cancer (NSCLC) is the most common type of lung cancer. Although significant advances have been achieved in the treatment of NSCLC during the past two decades, the 5-year survival rate of pa...

    Dingyi Li, **nxin Zhang, Zhiqiang Ding, Rongshuang Ai in Cell Biochemistry and Biophysics (2022)

  9. Article

    Open Access

    Cap-snatching inhibitors of influenza virus are inhibitory to the in vitro transcription of rice stripe virus

    Rice stripe virus (RSV) is one of the most important viral pathogens of rice in East Asia. The transcription of RSV is initiated by cap-snatching, a mechanism shared by influenza virus (IFV). This lends the po...

    Wenzhong Lin, Qingchen Zha, Wenwen Zhang, Guanwei Wu, Fei Yan in Phytopathology Research (2022)

  10. Article

    Open Access

    Plant Hormone Metabolome and Transcriptome Analysis of Dwarf and Wild-type Banana

    Gibberellin (GA), auxin (IAA) and brassinosteroid (BR) are indispensable in the process of plant growth and development. Currently, research on the regulatory mechanism of phytohormones in banana dwarfism is m...

    Biao Deng, Xuan Wang, **ng Long, Ren Fang in Journal of Plant Growth Regulation (2022)

  11. No Access

    Article

    Plasma membrane-nucleo-cytoplasmic coordination of a receptor-like cytoplasmic kinase promotes EDS1-dependent plant immunity

    Plants use cell-surface immune receptors to recognize pathogen-specific patterns to evoke basal immunity. ENHANCED DISEASE SUSCEPTIBILITY (EDS1) is known to be crucial for plant basal immunity, whereas its act...

    Yujia Li, Jiao Xue, Feng-Zhu Wang, **angjuan Huang, Ben-Qiang Gong in Nature Plants (2022)

  12. Article

    Open Access

    Deep oncopanel sequencing reveals within block position-dependent quality degradation in FFPE processed samples

    Clinical laboratories routinely use formalin-fixed paraffin-embedded (FFPE) tissue or cell block cytology samples in oncology panel sequencing to identify mutations that can predict patient response to targete...

    Yifan Zhang, Thomas M. Blomquist, Rebecca Kusko, Daniel Stetson in Genome Biology (2022)

  13. Article

    Open Access

    Amplicon-based sequencing and co-occurence network analysis reveals notable differences of microbial community structure in healthy and dandruff scalps

    Dandruff is a chronic, recurring, and common scalp problem that is caused by several etiopathogeneses with complex mechanisms. Management of this condition is typically achieved via antifungal therapies. Howev...

    Li Wang, Tao Yu, Yaxin Zhu, Yingfeng Luo, Fan Dong, Xuemei Lin in BMC Genomics (2022)

  14. Article

    Open Access

    Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

    Reproducible detection of inherited variants with whole genome sequencing (WGS) is vital for the implementation of precision medicine and is a complicated process in which each step affects variant call qualit...

    Bohu Pan, Luyao Ren, Vitor Onuchic, Meijian Guan, Rebecca Kusko in Genome Biology (2022)

  15. No Access

    Article

    Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology

    Circulating tumor DNA (ctDNA) sequencing is being rapidly adopted in precision oncology, but the accuracy, sensitivity and reproducibility of ctDNA assays is poorly understood. Here we report the findings of a...

    Ira W. Deveson, Binsheng Gong, Kevin Lai, Jennifer S. LoCoco in Nature Biotechnology (2021)

  16. Article

    Open Access

    A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency

    Oncopanel genomic testing, which identifies important somatic variants, is increasingly common in medical practice and especially in clinical trials. Currently, there is a paucity of reliable genomic reference...

    Wendell Jones, Binsheng Gong, Natalia Novoradovskaya, Dan Li in Genome Biology (2021)

  17. Article

    Open Access

    Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions

    Targeted sequencing using oncopanels requires comprehensive assessments of accuracy and detection sensitivity to ensure analytical validity. By employing reference materials characterized by the U.S. Food and ...

    Binsheng Gong, Dan Li, Rebecca Kusko, Natalia Novoradovskaya, Yifan Zhang in Genome Biology (2021)

  18. Article

    Open Access

    Comparison of new hyperspectral index and machine learning models for prediction of winter wheat leaf water content

    The leaf water content estimation model is established by hyperspectral technology, which is crucial and provides technical reference for precision irrigation.

    Juanjuan Zhang, Wen Zhang, Zhaoxiang Song, Wenzhong Tian in Plant Methods (2021)

  19. Article

    Open Access

    Multi-omics analysis of tumor angiogenesis characteristics and potential epigenetic regulation mechanisms in renal clear cell carcinoma

    Tumor angiogenesis, an essential process for cancer proliferation and metastasis, has a critical role in prognostic of kidney renal clear cell carcinoma (KIRC), as well as a target in guiding treatment with an...

    Wenzhong Zheng, Shiqiang Zhang, Huan Guo, **aobao Chen in Cell Communication and Signaling (2021)

  20. Article

    Open Access

    Author Correction: An extended Weight Kernel Density Estimation model forecasts COVID-19 onset risk and identifies spatiotemporal variations of lockdown effects in China

    A Correction to this paper has been published: https://doi.org/10.1038/s42003-021-01924-6

    Wenzhong Shi, Chengzhuo Tong, Anshu Zhang, Bin Wang, Zhicheng Shi in Communications Biology (2021)

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