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  1. Article

    Open Access

    SETDB1 regulates short interspersed nuclear elements and chromatin loop organization in mouse neural precursor cells

    Transposable elements play a critical role in maintaining genome architecture during neurodevelopment. Short Interspersed Nuclear Elements (SINEs), a major subtype of transposable elements, are known to harbor...

    Dai**g Sun, Yueyan Zhu, Wenzhu Peng, Shenghui Zheng, Jie Weng in Genome Biology (2024)

  2. No Access

    Article

    Effects of an anti-WSSV transgenic cyanobacterial oral agent on the development, reproduction, and physiology of Daphnia magna

    Trans-vp28 gene cyanobacteria have good efficacy as an oral agent against shrimp white spot syndrome virus (WSSV) infection in shrimp and have promising applications. However, little research on the environmental...

    Yupei Tong, Yang Xu, Wen Peng, Dingji Shi, Yuqing Li in Journal of Applied Phycology (2024)

  3. Article

    Open Access

    Therapeutic targeting of ARID1A-deficient cancer cells with RITA (Reactivating p53 and inducing tumor apoptosis)

    ARID1A, a component of the SWI/SNF chromatin-remodeling complex, is frequently mutated in various cancer types and has emerged as a potential therapeutic target. In this study, we observed that ARID1A-deficien...

    Zihuan Wang, Xu Zhang, Yuchen Luo, Yijiang Song, Cheng **ang in Cell Death & Disease (2024)

  4. No Access

    Article

    Genomic data and ecological niche modeling reveal an unusually slow rate of molecular evolution in the Cretaceous Eupteleaceae

    Living fossils are evidence of long-term sustained ecological success. However, whether living fossils have little molecular changes remains poorly known, particularly in plants. Here, we have introduced a nov...

    Kun-Li **ang, Sheng-Dan Wu, Lian Lian, Wen-Chuang He in Science China Life Sciences (2024)

  5. Article

    Open Access

    Comparative plastome analysis of the sister genera Ceratocephala and Myosurus (Ranunculaceae) reveals signals of adaptive evolution to arid and aquatic environments

    Expansion and contraction of inverted repeats can cause considerable variation of plastid genomes (plastomes) in angiosperms. However, little is known about whether structural variations of plastomes are assoc...

    **g Long, Wen-Chuang He, Huan-Wen Peng, Andrey S. Erst, Wei Wang in BMC Plant Biology (2024)

  6. Article

    Open Access

    TREM2 macrophage promotes cardiac repair in myocardial infarction by reprogramming metabolism via SLC25A53

    Efferocytosis and metabolic reprogramming of macrophages play crucial roles in myocardial infarction (MI) repair. TREM2 has been proven to participate in phagocytosis and metabolism, but how it modulates myoca...

    Shiyu Gong, Ming Zhai, Jiayun Shi, Guanye Yu, Zhijun Lei in Cell Death & Differentiation (2024)

  7. Article

    Open Access

    The ZJU index is associated with the risk of obstructive sleep apnea syndrome in Chinese middle-aged and older people: a cross-sectional study

    The ZJU index, a novel calculation that combines body mass index, triglycerides, fasting blood glucose and the ratio of alanine aminotransferase to aspartate aminotransferase, is a closely related measure of o...

    Li** Wang, Guqiao Nie, Fengqin Yan, Nianli Zhou in Lipids in Health and Disease (2023)

  8. No Access

    Article

    In vitro adventitious regeneration and plantlet transplantation of Atractylodes chinensis (DC.) Koidz., a valuable medicinal plant

    Triploid Atractylodes chinensis (DC.) Koidz. is a valuable genetic resource for medicinal plant breeding, and there is a demand to develop an efficient in vitro regeneration protocol to resolve triploid sterility...

    Wenhao Jia, Junbo Rong, Mengyang Zhang in Plant Cell, Tissue and Organ Culture (PCTO… (2023)

  9. Article

    Open Access

    Prematurely delivering mothers show reductions of lachnospiraceae in their gut microbiomes

    Preterm birth is the leading cause of perinatal morbidity and mortality. Despite evidence shows that imbalances in the maternal microbiome associates to the risk of preterm birth, the mechanisms underlying the...

    Ru Yang, **aoyu Li, Zhiye Ying, Zicheng Zhao, Yinan Wang, Qingyu Wang in BMC Microbiology (2023)

  10. No Access

    Article

    Application of AtMYB75 as a reporter gene in the study of symbiosis between tomato and Funneliformis mosseae

    Composite plants containing transgenic hairy roots produced with Agrobacterium rhizogenes-mediated transformation have become an important method to study the interaction between plants and arbuscular mycorrhizal...

    **uyuan Wang, Chong Teng, Kaidi Lyu, Qianqian Li, Wentao Peng, Lijuan Fan in Mycorrhiza (2023)

  11. No Access

    Article

    Use of terrestrial laser scanning to obtain the stem diameters of Larix olgensis and construct compatible taper-volume equations

    Using Hough transform to extract the stem diameter from TLS data to relative height of 0.7, the established compatible taper-volume equations was able to accurately estimate the stem volume.

    Dandan Li, Weiwei Jia, Haotian Guo, Fan Wang, Ye Ma, Wenyue Peng, Shaoqiu Zhang in Trees (2023)

  12. Article

    Open Access

    GBC: a parallel toolkit based on highly addressable byte-encoding blocks for extremely large-scale genotypes of species

    Whole -genome sequencing projects of millions of subjects contain enormous genotypes, entailing a huge memory burden and time for computation. Here, we present GBC, a toolkit for rapidly compressing large-scal...

    Liubin Zhang, Yangyang Yuan, Wenjie Peng, Bin Tang, Mulin Jun Li in Genome Biology (2023)

  13. No Access

    Article

    A convenient, reliable and directly visual selection marker for identifying transgenic lines of Solanum nigrum

    Solanum nigrum L. is an annual herb of Solanaceae and Solanum genus. S. nigrum has not been domesticated. S. nigrum produces a small, spherical, black, highly nutritious edible fruit. To achieve the potential of ...

    Wentao Peng, **uyuan Wang, Huitian Wei in Plant Cell, Tissue and Organ Culture (PCTO… (2023)

  14. Article

    Open Access

    Loss of TET2 impairs endothelial angiogenesis via downregulating STAT3 target genes

    Ischemic diseases represent a major global health care burden. Angiogenesis is critical in recovery of blood flow and repair of injured tissue in ischemic diseases. Ten–eleven translocation protein 2 (TET2), a...

    Yefei Shi, Bo Li, **nru Huang, Wenxin Kou, Ming Zhai, Yanxi Zeng in Cell & Bioscience (2023)

  15. No Access

    Article

    Acetylation licenses Th1 cell polarization to constrain Listeria monocytogenes infection

    T helper 1 (Th1) immunity is typically viewed as a critical adaptation by vertebrates against intracellular pathogens. Identifying novel targets to enhance Th1 cell differentiation and function is increasingly...

    Yanan Sophia Zhang, Dazhuan Eric **n, Zhizhang Wang in Cell Death & Differentiation (2022)

  16. Article

    Open Access

    ARIH2 regulates the proliferation, DNA damage and chemosensitivity of gastric cancer cells by reducing the stability of p21 via ubiquitination

    Ariadne homolog 2 (ARIH2) is a key member of the RING-between-RING (RBR) E3 ligase family, which is characterized by an RBR domain involved in the polyubiquitination process. However, the molecular mechanism a...

    Shengjun Geng, Wen Peng, Xue Wang, **aosong Hu, Hanghua Liang in Cell Death & Disease (2022)

  17. No Access

    Article

    Extracellular vesicles derived from human Sertoli cells: characterizations, proteomic analysis, and miRNA profiling

    Extracellular vesicles (EVs) contain thousands of proteins and nucleic acids, playing an important role in cell–cell communications. Sertoli cells have been essential in the testis as a “nurse cell”. However, ...

    **ao-Hui Tan, Sheng-Ji Gu, Wen-Jie Tian, Wen-Peng Song in Molecular Biology Reports (2022)

  18. No Access

    Article

    Isolation and genomic analysis of temperate phage 5W targeting multidrug-resistant Acinetobacter baumannii

    Temperate phages are potential therapeutic agents, but only a few temperate phages infecting multidrug-resistant Acinetobacter baumannii have been identified. In this study, we isolated 5W, a temperate phage that...

    Wenyi Peng, Fei Zeng, Zhiying Wu, Zeyuan **, Wanxia Li in Archives of Microbiology (2021)

  19. No Access

    Article

    Changes of Community Structure and Functional Feeding Groups of Benthic Macrofauna After Mangrove Afforestation in a Subtropical Intertidal Zone, China

    Afforestation is a primary response to the loss and degradation of mangroves worldwide. The successful restoration of mangrove ecosystems is in part indicated by the rebuilding of macrobenthic community. Howev...

    Yiyong Rao, Lizhe Cai, Su**g Fu, Wenqing Peng, **nwei Chen in Wetlands (2021)

  20. No Access

    Article

    Construction and application of easy-to-detect cyanobacteria with vp28 gene

    White Spot Syndrome Virus (WSSV) is the most harmful and pathogenic infectious agent in shrimp aquaculture. Vp28, a protein used to protect hosts against this virus, has successfully been expressed in nine hos...

    Min-Min Zhuang, Wen Peng, Yang Xu, **ao-Hui Jia in Journal of Applied Phycology (2021)

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