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  1. Article

    Open Access

    RNA-Seq Meta-analysis identifies genes in skeletal muscle associated with gain and intake across a multi-season study of crossbred beef steers

    Feed intake and body weight gain are economically important inputs and outputs of beef production systems. The purpose of this study was to discover differentially expressed genes that will be robust for feed ...

    Brittney N. Keel, Christina M. Zarek, John W. Keele, Larry A. Kuehn in BMC Genomics (2018)

  2. Article

    Open Access

    QTLs associated with dry matter intake, metabolic mid-test weight, growth and feed efficiency have little overlap across 4 beef cattle studies

    The identification of genetic markers associated with complex traits that are expensive to record such as feed intake or feed efficiency would allow these traits to be included in selection programs. To identi...

    Mahdi Saatchi, Jonathan E Beever, Jared E Decker, Dan B Faulkner in BMC Genomics (2014)

  3. No Access

    Article

    Beef cattle body temperature during climatic stress: a genome-wide association study

    Cattle are reared in diverse environments and collecting phenotypic body temperature (BT) measurements to characterize BT variation across diverse environments is difficult and expensive. To better understand ...

    Jeremy T. Howard, Stephen D. Kachman in International Journal of Biometeorology (2014)

  4. No Access

    Chapter

    Incorporation of Genetic Technologies Associated with Applied Reproductive Technologies to Enhance World Food Production

    Animal breeding and reproductive physiology have been closely related throughout the history of animal production science. Artificial insemination provides the best method of increasing the influence of sires ...

    Robert A. Cushman Ph.D., Tara G. McDaneld in Current and Future Reproductive Technologi… (2014)

  5. Article

    Open Access

    Comparison of molecular breeding values based on within- and across-breed training in beef cattle

    Although the efficacy of genomic predictors based on within-breed training looks promising, it is necessary to develop and evaluate across-breed predictors for the technology to be fully applied in the beef in...

    Stephen D Kachman, Matthew L Spangler, Gary L Bennett in Genetics Selection Evolution (2013)

  6. Article

    Open Access

    Association, effects and validation of polymorphisms within the NCAPG - LCORL locus located on BTA6 with feed intake, gain, meat and carcass traits in beef cattle

    In a previously reported genome-wide association study based on a high-density bovine SNP genoty** array, 8 SNP were nominally associated (P ≤ 0.003) with average daily gain (ADG) and 3 of these were also assoc...

    Amanda K Lindholm-Perry, Andrea K Sexten, Larry A Kuehn, Timothy PL Smith in BMC Genetics (2011)

  7. Article

    Open Access

    A multiway analysis for identifying high integrity bovine BACs

    In large genomics projects involving many different types of analyses of bacterial artificial chromosomes (BACs), such as fingerprinting, end sequencing (BES) and full BAC sequencing there are many opportuniti...

    Abhirami Ratnakumar, Wesley Barris, Sean McWilliam, Rudiger Brauning in BMC Genomics (2009)

  8. Article

    Open Access

    A physical map of the bovine genome

    Cattle are important agriculturally and relevant as a model organism. Previously described genetic and radiation hybrid (RH) maps of the bovine genome have been used to identify genomic regions and genes affec...

    Warren M Snelling, Readman Chiu, Jacqueline E Schein, Matthew Hobbs in Genome Biology (2007)

  9. Article

    Open Access

    Characterization of 954 bovine full-CDS cDNA sequences

    Genome assemblies rely on the existence of transcript sequence to stitch together contigs, verify assembly of whole genome shotgun reads, and annotate genes. Functional genomics studies also rely on transcript...

    Gregory P Harhay, Tad S Sonstegard, John W Keele, Michael P Heaton in BMC Genomics (2005)

  10. Article

    Open Access

    Linkage map** bovine EST-based SNP

    Existing linkage maps of the bovine genome primarily contain anonymous microsatellite markers. These maps have proved valuable for map** quantitative trait loci (QTL) to broad regions of the genome, but more...

    Warren M Snelling, Eduardo Casas, Roger T Stone, John W Keele in BMC Genomics (2005)

  11. Article

    Open Access

    Integrating linkage and radiation hybrid map** data for bovine chromosome 15

    Bovine chromosome (BTA) 15 contains a quantitative trait loci (QTL) for meat tenderness, as well as several breaks in synteny with human chromosome (HSA) 11. Both linkage and radiation hybrid (RH) maps of BTA ...

    Warren M Snelling, Mathieu Gautier, John W Keele, Timothy PL Smith in BMC Genomics (2004)

  12. No Access

    Article

    Beta-2-microglobulin haplotypes in U.S. beef cattle and association with failure of passive transfer in newborn calves

    Failure of passive transfer (FPT) is a condition in which neonates do not acquire protective serum levels of maternal antibodies. A principal component of antibody transport is the neonatal receptor for the Fc...

    Michael L. Clawson, Michael P. Heaton, Carol G. Chitko-McKown in Mammalian Genome (2004)

  13. No Access

    Article

    Prion gene sequence variation within diverse groups of U.S. sheep, beef cattle, and deer

    Prions are proteins that play a central role in transmissible spongiform encephalopathies in a variety of mammals. Among the most notable prion disorders in ungulates are scrapie in sheep, bovine spongiform en...

    Michael P. Heaton, Kreg A. Leymaster, Brad A. Freking, Deedra A. Hawk in Mammalian Genome (2003)