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  1. Article

    Open Access

    High-quality and universal empirical atomic charges for chemoinformatics applications

    Partial atomic charges describe the distribution of electron density in a molecule and therefore provide clues to the chemical behaviour of molecules. Recently, these charges have become popular in chemoinform...

    Stanislav Geidl, Tomáš Bouchal, Tomáš Raček in Journal of Cheminformatics (2015)

  2. Article

    Open Access

    AtomicChargeCalculator: interactive web-based calculation of atomic charges in large biomolecular complexes and drug-like molecules

    Partial atomic charges are a well-established concept, useful in understanding and modeling the chemical behavior of molecules, from simple compounds, to large biomolecular complexes with many reactive sites.

    Crina-Maria Ionescu, David Sehnal, Francesco L. Falginella in Journal of Cheminformatics (2015)

  3. No Access

    Article

    Utilization of an underground mining evaluation map incorporating the effect of landslides and surface flooding for land-use purpose

    A number of problems related to land use and foundations of new structures are encountered in underground mining areas. Potential suitability and/or unsuitability of lands for new structures must be considered...

    Marian Marschalko, Işık Yilmaz in Bulletin of Engineering Geology and the En… (2014)

  4. Article

    Open Access

    Empirical charges for chemoinformatics applications

    Tomáš Bouchal, Radka Svobodová Vařeková, Tomáš Raček in Journal of Cheminformatics (2014)

  5. Article

    Open Access

    Predicting pK a values from EEM atomic charges

    The acid dissociation constant p K a is a very important molecular property, and there is a strong interest in the development of reliable and fast methods for p K ...

    Radka Svobodová Vařeková, Stanislav Geidl in Journal of Cheminformatics (2013)

  6. No Access

    Article

    An indicative method for determination of the most hazardous changes in slopes of the subsidence basins in underground coal mining area in Ostrava (Czech Republic)

    Considering growing population and decreasing mineral resource reserves, the issue of undermining has been and shall remain very topical. This study aims to identify the mutual connections between mined out pa...

    Marian Marschalko, Isik Yilmaz in Environmental Monitoring and Assessment (2013)

  7. Article

    Open Access

    How the methodology of 3D structure preparation influences the quality of QSPR models?

    Stanislav Geidl, Roman Beránek, Radka Svobodová Vařeková in Journal of Cheminformatics (2012)

  8. No Access

    Article

    Evaluation of subsidence due to underground coal mining: an example from the Czech Republic

    This paper presents a case study dealing with variations on the ground surface due to the underground mining activities in the Ostrava–Karvina Coal District (Czech Republic) over the last 25 years. During this...

    Marian Marschalko, Martin Bednárik in Bulletin of Engineering Geology and the En… (2012)