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  1. Article

    Open Access

    Genotype-driven identification of a molecular network predictive of advanced coronary calcium in ClinSeq® and Framingham Heart Study cohorts

    One goal of personalized medicine is leveraging the emerging tools of data science to guide medical decision-making. Achieving this using disparate data sources is most daunting for polygenic traits. To this e...

    Cihan Oguz, Shurjo K. Sen, Adam R. Davis, Yi-** Fu in BMC Systems Biology (2017)

  2. Article

    Open Access

    Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines

    Massively-parallel cDNA sequencing (RNA-Seq) is a new technique that holds great promise for cardiovascular genomics. Here, we used RNA-Seq to study the transcriptomes of matched coronary artery disease cases ...

    Shurjo K Sen, Jennifer J Barb, Praveen F Cherukuri, David S Accame in BMC Genomics (2014)

  3. No Access

    Protocol

    Computational Methods for the Analysis of Primate Mobile Elements

    Transposable elements (TE), defined as discrete pieces of DNA that can move from one site to another site in genomes, represent significant components of eukaryotic genomes, including primates. Comparative gen...

    Richard Cordaux, Shurjo K. Sen, Miriam K. Konkel, Mark A. Batzer in Genetic Variation (2010)