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Article
Open AccessPARGT: a software tool for predicting antimicrobial resistance in bacteria
With the ever-increasing availability of whole-genome sequences, machine-learning approaches can be used as an alternative to traditional alignment-based methods for identifying new antimicrobial-resistance ge...
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Article
Open AccessPublisher Correction: Antimicrobial Resistance Prediction for Gram-Negative Bacteria via Game Theory-Based Feature Evaluation
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
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Article
Open AccessAntimicrobial Resistance Prediction for Gram-Negative Bacteria via Game Theory-Based Feature Evaluation
The increasing prevalence of antimicrobial-resistant bacteria drives the need for advanced methods to identify antimicrobial-resistance (AMR) genes in bacterial pathogens. With the availability of whole genome...
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Article
Open AccessAlignment-free clustering of large data sets of unannotated protein conserved regions using minhashing
Clustering of protein sequences is of key importance in predicting the structure and function of newly sequenced proteins and is also of use for their annotation. With the advent of multiple high-throughput se...
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Article
Open AccessComparative genomics reveals multiple pathways to mutualism for tick-borne pathogens
Multiple important human and livestock pathogens employ ticks as their primary host vectors. It is not currently known whether this means of infecting a host arose once or many times during evolution.
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Article
Open AccessA Java-based tool for the design of classification microarrays
Classification microarrays are used for purposes such as identifying strains of bacteria and determining genetic relationships to understand the epidemiology of an infectious disease. For these cases, mixed mi...
