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  1. Article

    Open Access

    Bacteria exposed to antiviral drugs develop antibiotic cross-resistance and unique resistance profiles

    Antiviral drugs are used globally as treatment and prophylaxis for long-term and acute viral infections. Even though antivirals also have been shown to have off-target effects on bacterial growth, the potentia...

    Veronica J. Wallace, Eric G. Sakowski, Sarah P. Preheim in Communications Biology (2023)

  2. No Access

    Article

    Interaction dynamics and virus–host range for estuarine actinophages captured by epicPCR

    Viruses impact microbial diversity, gene flow and function through virus–host interactions. Although metagenomics surveys are rapidly cataloguing viral diversity, methods are needed to capture specific virus–h...

    Eric G. Sakowski, Keith Arora-Williams, Funing Tian, Ahmed A. Zayed in Nature Microbiology (2021)

  3. Article

    Open Access

    Dynamics of microbial populations mediating biogeochemical cycling in a freshwater lake

    Microbial processes are intricately linked to the depletion of oxygen in in-land and coastal water bodies, with devastating economic and ecological consequences. Microorganisms deplete oxygen during biomass de...

    Keith Arora-Williams, Scott W. Olesen, Benjamin P. Scandella, Kyle Delwiche in Microbiome (2018)

  4. Article

    Open Access

    High resolution time series reveals cohesive but short-lived communities in coastal plankton

    Because microbial plankton in the ocean comprise diverse bacteria, algae, and protists that are subject to environmental forcing on multiple spatial and temporal scales, a fundamental open question is to what ...

    Antonio M. Martin-Platero, Brian Cleary, Kathryn Kauffman in Nature Communications (2018)

  5. Article

    Open Access

    Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes

    Adaptive radiations are important drivers of niche filling, since they rapidly adapt a single clade of organisms to ecological opportunities. Although thought to be common for animals and plants, adaptive radi...

    Jan-Hendrik Hehemann, Philip Arevalo, Manoshi S. Datta in Nature Communications (2016)

  6. No Access

    Article

    Surveys, simulation and single-cell assays relate function and phylogeny in a lake ecosystem

    Much remains unknown about what drives microbial community structure and diversity. Highly structured environments might offer clues. For example, it may be possible to identify metabolically similar species a...

    Sarah P. Preheim, Scott W. Olesen, Sarah J. Spencer, Arne Materna in Nature Microbiology (2016)