6 Result(s)

Article

Topics in machine learning for biomedical literature analysis and text retrieval

Rezarta Islamaj Doğan, Lana Yeganova in Journal of Biomedical Semantics (2012)

Article

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text

Determining usefulness of biomedical text mining systems requires realistic task definition and data selection criteria without artificial constraints, measuring performance aspects that go beyond traditional ...

Martin Krallinger, Miguel Vazquez, Florian Leitner, David Salgado… in BMC Bioinformatics (2011)

Article

Topics in machine learning for biomedical literature analysis and text retrieval

Rezarta Islamaj Doğan, Lana Yeganova in BMC Bioinformatics (2011)

Article

A context-blocks model for identifying clinical relationships in patient records

Patient records contain valuable information regarding explanation of diagnosis, progression of disease, prescription and/or effectiveness of treatment, and more. Automatic recognition of clinically important ...

Rezarta Islamaj Doğan, Aurélie Névéol, Zhiyong Lu in BMC Bioinformatics (2011)

Article

Features generated for computational splice-site prediction correspond to functional elements

Accurate selection of splice sites during the splicing of precursors to messenger RNA requires both relatively well-characterized signals at the splice sites and auxiliary signals in the adjacent exons and int...

Rezarta Islamaj Dogan, Lise Getoor, W John Wilbur, Stephen M Mount in BMC Bioinformatics (2007)

Article

Structural footprinting in protein structure comparison: the impact of structural fragments

One approach for speeding-up protein structure comparison is the projection approach, where a protein structure is mapped to a high-dimensional vector and structural similarity is approximated by distance between...

Elena Zotenko, Rezarta Islamaj Dogan, W John Wilbur… in BMC Structural Biology (2007)