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    Protocol

    Mathematical Modeling of Photo- and Thermomorphogenesis in Plants

    Increased day lengths and warm conditions inversely affect plant growth by directly modulating nuclear phyB, ELF3, and COP1 levels. Quantitative measures of the hypocotyl length have been key to gaining a deep...

    Gabriel Rodriguez-Maroto, Pablo Catalán, Cristina Nieto, Salomé Prat in Thermomorphogenesis (2024)

  2. Article

    Open Access

    Seeking patterns of antibiotic resistance in ATLAS, an open, raw MIC database with patient metadata

    Antibiotic resistance represents a growing medical concern where raw, clinical datasets are under-exploited as a means to track the scale of the problem. We therefore sought patterns of antibiotic resistance i...

    Pablo Catalán, Emily Wood, Jessica M. A. Blair, Ivana Gudelj in Nature Communications (2022)

  3. Article

    Open Access

    Adaptive multiscapes: an up-to-date metaphor to visualize molecular adaptation

    Wright’s metaphor of the fitness landscape has shaped and conditioned our view of the adaptation of populations for almost a century. Since its inception, and including criticism raised by Wright himself, the ...

    Pablo Catalán, Clemente F. Arias, Jose A. Cuesta, Susanna Manrubia in Biology Direct (2017)

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    Article

    Sink strength manipulation in branches of a Mediterranean woody plant suggests sink-driven allocation of biomass in fruits but not of nutrients in seeds

    The relative autonomy of branches within an individual plant may favor different resource allocation responses after reproductive losses. The assessment of these reproductive strategies at the branch level bef...

    Pablo Catalán, Juan A. Delgado, María D. Jiménez in Acta Physiologiae Plantarum (2016)

  5. Article

    Open Access

    toyLIFE: a computational framework to study the multi-level organisation of the genotype-phenotype map

    The genotype-phenotype map is an essential object to understand organismal complexity and adaptability. However, its experimental characterisation is a daunting task. Thus, simple models have been proposed and...

    Clemente F. Arias, Pablo Catalán, Susanna Manrubia, José A. Cuesta in Scientific Reports (2014)