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Article
Key physiological traits for drought tolerance identified through phenoty** a large set of slicing cucumber (Cucumis sativus L.) genotypes under field and water-stress conditions
Cucumber is one of the important salad vegetables cultivated worldwide and is highly sensitive to water stress. However, till date, no drought-tolerant cucumber genotypes have been identified using a large set...
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Article
Open AccessDissection of QTLs conferring drought tolerance in B. carinata derived B. juncea introgression lines
Drought is one of the important abiotic stresses that can significantly reduce crop yields. In India, about 24% of Brassica juncea (Indian mustard) cultivation is taken up under rainfed conditions, leading to low...
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Protocol
Whole Genome Wide SSR Markers Identification Based on ddRADseq Data
The advent of advanced NGS technologies have led to the generation of enormous amount of sequence data which further aid in the discovery of the various type of markers such as SSRs, SNPs, InDels, etc. Among a...
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Chapter
Application of AI/ML Approaches for Livestock Improvement and Management
At present, livestock is one of the demanding agricultural subsectors in develo** countries due to the growing population, advanced urbanization, and escalating demand for animal food. In addition, livestock...
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Chapter
Current and Future Strategies in Breeding Lentil for Abiotic Stresses
There has been a lot of research on biotic stresses in lentils because they are visible and lead to decline in production and quality losses. Abiotic stresses, on the other hand, are rapidly being identified a...
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Chapter
Computational Genomics Approaches for Livestock Improvement and Management
Livestock (domesticated animals such as cattle, buffalo) are important economic and genetic resources used in agriculture to provide labour, and commodities such as meat, eggs, milk, fur, leather, and wool. Du...
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Chapter
Recent Advances in Genomics, Genetic Resources of Watermelon
Watermelon is one of the most important cucurbit crops, belonging to the genus Citrullus Schrad. ex Eckl. et Zeyh. In 2013, the first draft genome sequence of East Asian watermelon cultivar ‘97103’ (2n = 2 = 22) ...
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Article
Whole genome sequencing of spotted stem borer, Chilo partellus, reveals multiple genes encoding enzymes for detoxification of insecticides
Spotted stem borer, Chilo partellus, is the most important constraint for increasing the production and productivity of maize and sorghum, the two major coarse cereals in Asia and Africa. The levels of resistance...
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Article
Correction to: Understanding population structure and detection of QTLs for curding related traits in Indian cauliflower by genoty** by sequencing analysis
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Article
Understanding population structure and detection of QTLs for curding-related traits in Indian cauliflower by genoty** by sequencing analysis
Curd initiation and development are complex traits and highly responsive for different temperature ranges in cauliflower. The present study was aimed to identify QTLs for eight traits associated with curding b...
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Article
Open AccessRevelation of candidate genes and molecular mechanism of reproductive seasonality in female rohu (Labeo rohita Ham.) by RNA sequencing
Carp fish, rohu (Labeo rohita Ham.) is important freshwater aquaculture species of South-East Asia having seasonal reproductive rhythm. There is no holistic study at transcriptome level revealing key candidate ge...
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Article
Genomic analysis of polycarpellary rice (Oryza sativa L.) through whole genome resequencing
There is a natural floral organ mutant of rice (var. Jugal) where the florets, popularly known as spikelet bear multiple carpels and produce multiple kernels in most of its grain. In our earlier work a detaile...
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Article
De novo transcriptome sequencing assisted identification of terpene synthases from black pepper (Piper nigrum) berry
Though the volatile profiles of black pepper have been reported already, the information on terpene synthase family genes is not known. In this study, using a combinatorial approach, the berry hybrid transcrip...
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Chapter
Mango Genomic Resources and Databases
Web resources are the archival repository for data and also a research accelerator tool for global community, economizing cost of data along with the advantage of rapidity, and ease of accessibility. Recently,...
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Article
Liver-Specific microRNA Identification in Farmed Carp, Labeo bata (Hamilton, 1822), Fed with Starch Diet Using High-Throughput Sequencing
The liver is an important central organ, which controls carbohydrate metabolism through maintaining glucose homeostasis by a tightly regulated system of genes or enzymes. The microRNAs are small non-coding RNA...
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Article
Open AccessRNAseq analysis reveals drought-responsive molecular pathways with candidate genes and putative molecular markers in root tissue of wheat
Drought is one of the major impediments in wheat productivity. Traditional breeding and marker assisted QTL introgression had limited success. Available wheat genomic and RNA-seq data can decipher novel drough...
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Article
Open AccessTranscriptomic signature reveals mechanism of flower bud distortion in witches’-broom disease of soybean (Glycine max)
Soybean (Glycine max L. Merril) crop is major source of edible oil and protein for human and animals besides its various industrial uses including biofuels. Phytoplasma induced floral bud distortion syndrome (FBD...
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Article
Development of transcriptome based web genomic resources of yellow mosaic disease in Vigna mungo
Vigna mungo (Urdbean) is cultivated in the tropical and sub-tropical continental region of Asia. It is not only important source of dietary protein and nutritional elements, but also of i...
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Article
Open AccessDevelopment of a model webserver for breed identification using microsatellite DNA marker
Identification of true to breed type animal for conservation purpose is imperative. Breed dilution is one of the major problems in sustainability except cases of commercial crossbreeding under controlled condi...
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Article
Open AccessIn silico mining of putative microsatellite markers from whole genome sequence of water buffalo (Bubalus bubalis) and development of first BuffSatDB
Though India has sequenced water buffalo genome but its draft assembly is based on cattle genome BTau 4.0, thus de novo chromosome wise assembly is a major pending issue for global community. The existing radiati...
