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  1. Article

    Open Access

    Laniakea@ReCaS: exploring the potential of customisable Galaxy on-demand instances as a cloud-based service

    Improving the availability and usability of data and analytical tools is a critical precondition for further advancing modern biological and biomedical research. For instance, one of the many ramifications of ...

    Marco Antonio Tangaro, Pietro Mandreoli, Matteo Chiara in BMC Bioinformatics (2021)

  2. Article

    Open Access

    ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community

    The advent of Next Generation Sequencing (NGS) technologies and the concomitant reduction in sequencing costs allows unprecedented high throughput profiling of biological systems in a cost-efficient manner. Mo...

    Tiziana Castrignanò, Silvia Gioiosa, Tiziano Flati, Mirko Cestari in BMC Bioinformatics (2020)

  3. Article

    Open Access

    CoVaCS: a consensus variant calling system

    The advent and ongoing development of next generation sequencing technologies (NGS) has led to a rapid increase in the rate of human genome re-sequencing data, paving the way for personalized genomics and prec...

    Matteo Chiara, Silvia Gioiosa, Giovanni Chillemi, Mattia D’Antonio in BMC Genomics (2018)

  4. Article

    Open Access

    A-GAME: improving the assembly of pooled functional metagenomics sequence data

    Expression screening of environmental DNA (eDNA) libraries is a popular approach for the identification and characterization of novel microbial enzymes with promising biotechnological properties. In such “func...

    Matteo Chiara, Antonio Placido, Ernesto Picardi, Luigi Ruggiero Ceci in BMC Genomics (2018)