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  1. Article

    Open Access

    Common and mutation specific phenotypes of KRAS and BRAF mutations in colorectal cancer cells revealed by integrative -omics analysis

    Genes in the Ras pathway have somatic mutations in at least 60 % of colorectal cancers. Despite activating the same pathway, the BRAF V600E mutation and the prevalent mutations in codon 12 and 13 of KRAS have all...

    Snehangshu Kundu, Muhammad Akhtar Ali in Journal of Experimental & Clinical Cancer … (2021)

  2. No Access

    Article

    A novel podocyte protein, R3h domain containing-like, inhibits TGF-β-induced p38 MAPK and regulates the structure of podocytes and glomerular basement membrane

    Not only in kidney glomerular physiological function but also glomerular pathology especially in diabetic condition, glomerular podocytes play pivotal roles. Therefore, it is important to increase our knowledg...

    Takahiro Ishikawa, Minoru Takemoto, Yoshihiro Akimoto in Journal of Molecular Medicine (2021)

  3. No Access

    Article

    1p/19q co-deletion status is associated with distinct tumor-associated macrophage infiltration in IDH mutated lower-grade gliomas

    Tumor-associated macrophages (TAM)s are critical regulators of glioma progression. As yet, however, TAMs in isocitrate dehydrogenase (IDH) mutated lower-grade gliomas (LGGs) have not been thoroughly investigat...

    Yanyu Zhang, Yuan **e, Liqun He, Jiefu Tang, Qiyuan He, Qingze Cao in Cellular Oncology (2021)

  4. Article

    Open Access

    Restoration of KMT2C/MLL3 in human colorectal cancer cells reinforces genome-wide H3K4me1 profiles and influences cell growth and gene expression

    The histone 3 lysine 4 (H3K4) monomethylase KMT2C is mutated across several cancer types; however, the effects of mutations on epigenome organization, gene expression, and cell growth are not clear. A frequent...

    Chatarina Larsson, Lina Cordeddu, Lee Siggens, Tatjana Pandzic in Clinical Epigenetics (2020)

  5. Article

    Open Access

    Linking FOXO3, NCOA3, and TCF7L2 to Ras pathway phenotypes through a genome-wide forward genetic screen in human colorectal cancer cells

    The Ras pathway genes KRAS, BRAF, or ERBBs have somatic mutations in ~ 60% of human colorectal carcinomas. At present, it is unknown whether the remaining cases lack mutations activating the Ras pathway or whethe...

    Snehangshu Kundu, Muhammad Akhtar Ali, Niklas Handin, Narendra Padhan in Genome Medicine (2018)

  6. Article

    Open Access

    Loss of DIP2C in RKO cells stimulates changes in DNA methylation and epithelial-mesenchymal transition

    The disco-interacting protein 2 homolog C (DIP2C) gene is an uncharacterized gene found mutated in a subset of breast and lung cancers. To understand the role of DIP2C in tumour development we studied the gene in...

    Chatarina Larsson, Muhammad Akhtar Ali, Tatjana Pandzic, Anders M. Lindroth in BMC Cancer (2017)