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  1. No Access

    Protocol

    ShapeMetrics: A 3D Cell Segmentation Pipeline for Single-Cell Spatial Morphometric Analysis

    There is a growing need for single-cell level data analysis in correlation with the advancements of microscopy techniques. Morphology-based statistics gathered from individual cells are essential for detection...

    Ceren Pajanoja, Laura Kerosuo in Embryo Models In Vitro (2024)

  2. Article

    Open Access

    Immunoglobulin superfamily member 3 is required for the vagal neural crest cell migration and enteric neuronal network organization

    The immunoglobulin (Ig) superfamily members are involved in cell adhesion and migration, complex multistep processes that play critical roles in embryogenesis, wound healing, tissue formation, and many other p...

    Jayendrakishore Tanjore Ramanathan, Tomáš Zárybnický, Pauliina Filppu in Scientific Reports (2023)

  3. Article

    Open Access

    Maintenance of pluripotency-like signature in the entire ectoderm leads to neural crest stem cell potential

    The ability of the pluripotent epiblast to contribute progeny to all three germ layers is thought to be lost after gastrulation. The later-forming neural crest (NC) rises from ectoderm and it remains poorly un...

    Ceren Pajanoja, Jenny Hsin, Bradley Olinger, Andrew Schiffmacher in Nature Communications (2023)

  4. Article

    Open Access

    A ubiquitin-based effector-to-inhibitor switch coordinates early brain, craniofacial, and skin development

    The molecular mechanisms that coordinate patterning of the embryonic ectoderm into spatially distinct lineages to form the nervous system, epidermis, and neural crest-derived craniofacial structures are unclea...

    Anthony J. Asmar, Shaun R. Abrams, Jenny Hsin, Jason C. Collins in Nature Communications (2023)

  5. Article

    Open Access

    Novel roles of phentolamine in protecting axon myelination, muscle atrophy, and functional recovery following nerve injury

    Incomplete functional recovery after peripheral nerve injury (PNI) often results in devastating physical disabilities in human patients. Despite improved progress in surgical and non-surgical approaches, achie...

    Zarin Zainul, Bo Ma, Mert Koka, Jenny L. Wilkerson, Yuma T. Ortiz in Scientific Reports (2022)

  6. Article

    Open Access

    Neural crest stem cells from human epidermis of aged donors maintain their multipotency in vitro and in vivo

    Neural crest (NC) cells are multipotent stem cells that arise from the embryonic ectoderm, delaminate from the neural tube in early vertebrate development and migrate throughout the develo** embryo, where th...

    Samaneh Moghadasi Boroujeni, Alison Koontz, Georgios Tseropoulos in Scientific Reports (2019)

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    Protocol

    In Vitro Maintenance of Multipotent Neural Crest Stem Cells as Crestospheres

    Neural crest cells are a critical source of many cell types of the vertebrate body. However, as a stem cell population they are peculiar because of the transient nature of their stem cell niche; soon after the...

    Sofie Mohlin, Laura Kerosuo in Stem Cell Niche (2019)

  8. No Access

    Protocol

    Spatial Genomic Analysis: A Multiplexed Transcriptional Profiling Method that Reveals Subpopulations of Cells Within Intact Tissues

    Here, we present Spatial Genomic Analysis (SGA), a quantitative single-cell transcriptional profiling method that takes advantage of single-molecule imaging of individual transcripts for up to a hundred genes....

    Antti Lignell, Laura Kerosuo in Stem Cell Niche (2019)

  9. Article

    Open Access

    Identification of a neural crest stem cell niche by Spatial Genomic Analysis

    The neural crest is an embryonic population of multipotent stem cells that form numerous defining features of vertebrates. Due to lack of reliable techniques to perform transcriptional profiling in intact tiss...

    Antti Lignell, Laura Kerosuo, Sebastian J. Streichan, Long Cai in Nature Communications (2017)

  10. No Access

    Article

    A2B5+/GFAP+ Cells of Rat Spinal Cord Share a Similar Lipid Profile with Progenitor Cells: A Comparative Lipidomic Study

    The central nervous system (CNS) harbors multiple glial fibrillary acidic protein (GFAP) expressing cell types. In addition to the most abundant cell type of the CNS, the astrocytes, various stem cells and pr...

    Yutaka Itokazu, Nobuyoshi Tajima, Laura Kerosuo in Neurochemical Research (2016)