7 Result(s)

Article

Regional connectivity drove bidirectional transmission of SARS-CoV-2 in the Middle East during travel restrictions

Regional connectivity and land travel have been identified as important drivers of SARS-CoV-2 transmission. However, the generalizability of this finding is understudied outside of well-sampled, highly connect...

Edyth Parker, Catelyn Anderson, Mark Zeller, Ahmad Tibi… in Nature Communications (2022)

Article

Predicting the evolution of the Lassa virus endemic area and population at risk over the next decades

Lassa fever is a severe viral hemorrhagic fever caused by a zoonotic virus that repeatedly spills over to humans from its rodent reservoirs. It is currently not known how climate and land use changes could aff...

Raphaëlle Klitting, Liana E. Kafetzopoulou, Wim Thiery… in Nature Communications (2022)

Article

Develo** a standardized but extendable framework to increase the findability of infectious disease datasets

Biomedical datasets are increasing in size, stored in many repositories, and face challenges in FAIRness (findability, accessibility, interoperability, reusability). As a Consortium of infectious disease resea...

Ginger Tsueng, Marco A. Alvarado Cano, José Bento, Candice Czech… in Scientific Data (2023)

Article

Addressing barriers in FAIR data practices for biomedical data

Laura D. Hughes, Ginger Tsueng, Jack DiGiovanna, Thomas D. Horvath… in Scientific Data (2023)

Article

Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources

Outbreak.info Research Library is a standardized, searchable interface of coronavirus disease 2019 (COVID-19) and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) publications, clinical trials, dat...

Ginger Tsueng, Julia L. Mullen, Manar Alkuzweny, Marco Cano… in Nature Methods (2023)

Article

Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations

In response to the emergence of SARS-CoV-2 variants of concern, the global scientific community, through unprecedented effort, has sequenced and shared over 11 million genomes through GISAID, as of May 2022. T...

Karthik Gangavarapu, Alaa Abdel Latif, Julia L. Mullen, Manar Alkuzweny… in Nature Methods (2023)

Article

Schema Playground: a tool for authoring, extending, and using metadata schemas to improve FAIRness of biomedical data

Biomedical researchers are strongly encouraged to make their research outputs more Findable, Accessible, Interoperable, and Reusable (FAIR). While many biomedical research outputs are more readily accessible t...

Marco A. Cano, Ginger Tsueng, **nghua Zhou, Jiwen **n… in BMC Bioinformatics (2023)