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  1. Article

    Open Access

    A multi-center, prospective cohort study of whole blood gene expression in the tuberculosis-diabetes interaction

    Diabetes mellitus (DM) increases tuberculosis (TB) severity. We compared blood gene expression in adults with pulmonary TB, with or without diabetes mellitus (DM) from sites in Brazil and India. RNA sequencing...

    Artur T. L. Queiroz, Caian L. Vinhaes, Eduardo R. Fukutani in Scientific Reports (2023)

  2. Article

    Open Access

    Integration of metabolomics and transcriptomics reveals novel biomarkers in the blood for tuberculosis diagnosis in children

    Pediatric tuberculosis (TB) remains a major global health problem. Improved pediatric diagnostics using readily available biosources are urgently needed. We used liquid chromatography-mass spectrometry to anal...

    Noton K. Dutta, Jeffrey A. Tornheim, Kiyoshi F. Fukutani in Scientific Reports (2020)

  3. Article

    Open Access

    Aging increases the systemic molecular degree of inflammatory perturbation in patients with tuberculosis

    Tuberculosis (TB) is a chronic infection that can affect individuals of all ages. The description of determinants of immunopathogenesis in TB is of tremendous interest due to the perspective of finding a relia...

    Deivide Oliveira-de-Souza, Caian L. Vinhaes, María B. Arriaga in Scientific Reports (2020)

  4. Article

    Open Access

    Differential expression of polyamine biosynthetic pathways in skin lesions and in plasma reveals distinct profiles in diffuse cutaneous leishmaniasis

    Tegumentary leishmaniasis (TL) is a parasitic disease that can result in wide spectrum clinical manifestations. It is necessary to understand host and parasite determinants of clinical outcomes to identify nov...

    Hayna Malta-Santos, Jaqueline França-Costa, Amanda Macedo in Scientific Reports (2020)

  5. Article

    Open Access

    Multifocal tuberculosis-associated immune reconstitution inflammatory syndrome – a case report of a complicated scenario

    Tuberculosis (TB)-associated Immune reconstitution inflammatory syndrome (TB-IRIS) is an aberrant inflammatory response in TB patients with advanced human immunodeficiency virus coinfection, after antiretrovir...

    Gopalan Narendran, Deivide Oliveira-de-Souza, Caian L. Vinhaes in BMC Infectious Diseases (2019)

  6. Article

    Open Access

    Molecular degree of perturbation of plasma inflammatory markers associated with tuberculosis reveals distinct disease profiles between Indian and Chinese populations

    Tuberculosis (TB) is a chronic inflammatory disease caused by Mycobacterium tuberculosis infection which causes tremendous morbidity and mortality worldwide. Clinical presentation of TB patients is very diverse a...

    Deivide Oliveira-de-Souza, Caian L. Vinhaes, Maria B. Arriaga in Scientific Reports (2019)

  7. Article

    Open Access

    Author Correction: Differential expression of CXCR3 and CCR6 on CD4+ T-lymphocytes with distinct memory phenotypes characterizes tuberculosis-associated immune reconstitution inflammatory syndrome

    A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper.

    Paulo S. Silveira-Mattos, Gopalan Narendran, Kevan Akrami in Scientific Reports (2019)

  8. Article

    Open Access

    Differential expression of CXCR3 and CCR6 on CD4+ T-lymphocytes with distinct memory phenotypes characterizes tuberculosis-associated immune reconstitution inflammatory syndrome

    Immune reconstitution inflammatory syndrome (IRIS) occurs in up to 40% of individuals co-infected with pulmonary tuberculosis (PTB) and HIV, primarily upon antiretroviral therapy (ART) initiation. Phenotypic c...

    Paulo S. Silveira-Mattos, Gopalan Narendran, Kevan Akrami in Scientific Reports (2019)

  9. Article

    Open Access

    Tuberculosis-associated anemia is linked to a distinct inflammatory profile that persists after initiation of antitubercular therapy

    Pulmonary tuberculosis (PTB) is associated with chronic inflammation and anemia. How anemia impacts systemic inflammation in PTB patients undergoing antitubercular therapy (ATT) is not fully understood. In the...

    Leonardo Gil-Santana, Luís A. B. Cruz, María B. Arriaga in Scientific Reports (2019)

  10. Article

    Open Access

    CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses

    The analysis of modular gene co-expression networks is a well-established method commonly used for discovering the systems-level functionality of genes. In addition, these studies provide a basis for the disco...

    Pedro S. T. Russo, Gustavo R. Ferreira, Lucas E. Cardozo in BMC Bioinformatics (2018)

  11. Article

    Open Access

    Seroconversion to Lutzomyia intermedia LinB-13 as a biomarker for develo** cutaneous leishmaniasis

    Sand flies inject saliva while feeding in the vertebrate host and anti-saliva antibodies can be used as biomarkers of exposure to Leishmania vectors. We expressed recombinant salivary proteins from Lutzomyia inte...

    Augusto M. Carvalho, Kiyoshi F. Fukutani, Rohit Sharma in Scientific Reports (2017)

  12. Article

    Open Access

    Systems Immunology of Diabetes-Tuberculosis Comorbidity Reveals Signatures of Disease Complications

    Comorbid diabetes mellitus (DM) increases tuberculosis (TB) risk and adverse outcomes but the pathological interactions between DM and TB remain incompletely understood. We performed an integrative analysis of...

    Cesar A. Prada-Medina, Kiyoshi F. Fukutani, Nathella Pavan Kumar in Scientific Reports (2017)

  13. Article

    Open Access

    Serological survey of Leishmaniainfection in blood donors in Salvador, Northeastern Brazil

    Visceral Leishmaniasis is endemic to Brazil, where it is caused by Leishmania infantum (syn. Leishmania chagasi). Following parasite inoculation, individuals may experience asymptomatic infection, raising the pos...

    Kiyoshi F Fukutani, Virgínia Figueiredo, Fabiana S Celes in BMC Infectious Diseases (2014)

  14. Article

    Open Access

    Towards a precise test for malaria diagnosis in the Brazilian Amazon: comparison among field microscopy, a rapid diagnostic test, nested PCR, and a computational expert system based on artificial neural networks

    Accurate malaria diagnosis is mandatory for the treatment and management of severe cases. Moreover, individuals with asymptomatic malaria are not usually screened by health care facilities, which further compl...

    Bruno B Andrade, Antonio Reis-Filho, Austeclino M Barros in Malaria Journal (2010)