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  1. Article

    Open Access

    Processing of a single ribonucleotide embedded into DNA by human nucleotide excision repair and DNA polymerase η

    DNA polymerases often incorporate non-canonical nucleotide, i.e., ribonucleoside triphosphates into the genomic DNA. Aberrant accumulation of ribonucleotides in the genome causes various cellular abnormalities...

    Akira Sassa, Haruto Tada, Ayuna Takeishi, Kaho Harada, Megumi Suzuki in Scientific Reports (2019)

  2. Article

    Open Access

    Construction and applications of exon-trap** gene-targeting vectors with a novel strategy for negative selection

    Targeted gene modification by homologous recombination provides a powerful tool for studying gene function in cells and animals. In higher eukaryotes, non-homologous integration of targeting vectors occurs sev...

    Shinta Saito, Kiyoe Ura, Miho Kodama, Noritaka Adachi in BMC Research Notes (2015)

  3. Article

    Open Access

    Nap1 stimulates homologous recombination by RAD51 and RAD54 in higher-ordered chromatin containing histone H1

    Homologous recombination plays essential roles in mitotic DNA double strand break (DSB) repair and meiotic genetic recombination. In eukaryotes, RAD51 promotes the central homologous-pairing step during homolo...

    Shinichi Machida, Motoki Takaku, Masae Ikura, Jiying Sun in Scientific Reports (2014)

  4. No Access

    Article

    Histone methyltransferases: regulation of transcription and contribution to human disease

    Histone modifications contribute to the precise regulation of transcription by recruiting non-histone proteins and controlling chromatin conformation. These covalent modifications are dynamically regulated by ...

    Keisuke Nimura, Kiyoe Ura, Yasufumi Kaneda in Journal of Molecular Medicine (2010)

  5. No Access

    Article

    A histone H3 lysine 36 trimethyltransferase links Nkx2-5 to Wolf–Hirschhorn syndrome

    Histone H3 trimethylation at lysine 36 (H3K36me3) is associated with actively transcribed regions and has been proposed to provide landmarks for ongoing transcription. Here, an H3K36me3-specific histone methyl...

    Keisuke Nimura, Kiyoe Ura, Hidetaka Shiratori, Masato Ikawa, Masaru Okabe in Nature (2009)

  6. No Access

    Protocol

    Reconstitution of Chromatin In Vitro

    It is now generally believed that DNA methylation is responsible for genomic imprinting in mammals (1). Recent experimental evidence has provided an elegant mechanism for repression of gene expression by DNA meth...

    Kiyoe Ura, Yasufumi Kaneda in Genomic Imprinting (2002)