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Self-supervised Longitudinal Neighbourhood Embedding

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  1. Chapter and Conference Paper

    Joint Data Harmonization and Group Cardinality Constrained Classification

    To boost the power of classifiers, studies often increase the size of existing samples through the addition of independently collected data sets. Doing so requires harmonizing the data for demographic and acqu...

    Yong Zhang, Sang Hyun Park, Kilian M. Pohl in Medical Image Computing and Computer-Assis… (2016)

  2. Chapter and Conference Paper

    Solving Logistic Regression with Group Cardinality Constraints for Time Series Analysis

    We propose an algorithm to distinguish 3D+t images of healthy from diseased subjects by solving logistic regression based on cardinality constrained, group sparsity. This method reduces the risk of overfitting...

    Yong Zhang, Kilian M. Pohl in Medical Image Computing and Computer-Assis… (2015)

  3. Chapter and Conference Paper

    FLOOR: Fusing Locally Optimal Registrations

    Most registration algorithms, such as Demons [1], align two scans by iteratively finding the deformation minimizing the image dissimilarity at each location and smoothing this minimum across the image domain. ...

    Dong Hye Ye, Jihun Hamm, Benoit Desjardins in Medical Image Computing and Computer-Assis… (2013)

  4. Chapter and Conference Paper

    Collaborative Multi Organ Segmentation by Integrating Deformable and Graphical Models

    Organ segmentation is a challenging problem on which significant progress has been made. Deformable models (DM) and graphical models (GM) are two important categories of optimization based image segmentation m...

    Mustafa Gökhan Uzunbaş, Chao Chen in Medical Image Computing and Computer-Assis… (2013)

  5. Chapter and Conference Paper

    Regional Manifold Learning for Deformable Registration of Brain MR Images

    We propose a method for deformable registration based on learning the manifolds of individual brain regions. Recent publications on registration of medical images advocate the use of manifold learning in order...

    Dong Hye Ye, Jihun Hamm, Dong** Kwon in Medical Image Computing and Computer-Assis… (2012)

  6. Chapter and Conference Paper

    Temporal Shape Analysis via the Spectral Signature

    In this paper, we adapt spectral signatures for capturing morphological changes over time. Advanced techniques for capturing temporal shape changes frequently rely on first registering the sequence of shapes a...

    Elena Bernardis, Ender Konukoglu in Medical Image Computing and Computer-Assis… (2012)

  7. Chapter and Conference Paper

    Joint Segmentation and Deformable Registration of Brain Scans Guided by a Tumor Growth Model

    This paper presents an approach for joint segmentation and deformable registration of brain scans of glioma patients to a normal atlas. The proposed method is based on the Expectation Maximization (EM) algorit...

    Ali Gooya, Kilian M. Pohl, Michel Bilello in Medical Image Computing and Computer-Assis… (2011)

  8. Chapter and Conference Paper

    Logarithm Odds Maps for Shape Representation

    The concept of the Logarithm of the Odds (LogOdds) is frequently used in areas such as artificial neural networks, economics, and biology. Here, we utilize LogOdds for a shape representation that demonstrates ...

    Kilian M. Pohl, John Fisher, Martha Shenton in Medical Image Computing and Computer-Assis… (2006)

  9. Chapter and Conference Paper

    A Unifying Approach to Registration, Segmentation, and Intensity Correction

    We present a statistical framework that combines the registration of an atlas with the segmentation of magnetic resonance images. We use an Expectation Maximization-based algorithm to find a solution within th...

    Kilian M. Pohl, John Fisher, James J. Levitt in Medical Image Computing and Computer-Assis… (2005)

  10. Chapter and Conference Paper

    Coupling Statistical Segmentation and PCA Shape Modeling

    This paper presents a novel segmentation approach featuring shape constraints of multiple structures. A framework is developed combining statistical shape modeling with a maximum a posteriori segmentation prob...

    Kilian M. Pohl, Simon K. Warfield in Medical Image Computing and Computer-Assis… (2004)

  11. Chapter and Conference Paper

    Incorporating Non-rigid Registration into Expectation Maximization Algorithm to Segment MR Images

    The paper introduces an algorithm which allows the automatic segmentation of multi channel magnetic resonance images. We extended the Expectation Maximization-Mean Field Approximation Segmenter, to include Loc...

    Kilian M. Pohl, William M. Wells in Medical Image Computing and Computer-Assis… (2002)