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  1. Article

    Open Access

    Simultaneous de novo calling and phasing of genetic variants at chromosome-scale using NanoStrand-seq

    The successful accomplishment of the first telomere-to-telomere human genome assembly, T2T-CHM13, marked a milestone in achieving completeness of the human reference genome. The upcoming era of genome study wi...

    **uzhen Bai, Zonggui Chen, Kexuan Chen, Zixin Wu, Rui Wang, Jun’e Liu in Cell Discovery (2024)

  2. No Access

    Article

    Construction and validation of a risk-prediction model for chemotherapy-related cognitive impairment in patients with breast cancer

    To identify risk factors of chemotherapy-related cognitive impairment (CRCI) and construct and validate a visual prediction model of such for patients with breast cancer.

    Yu Liu, Ruo-Lin Li, Lu Chen, Fu-Yun Zhao, Ya-Li Su in Journal of Cancer Survivorship (2024)

  3. Article

    Open Access

    Map** crossover events of mouse meiotic recombination by restriction fragment ligation-based Refresh-seq

    Single-cell whole-genome sequencing methods have undergone great improvements over the past decade. However, allele dropout, which means the inability to detect both alleles simultaneously in an individual dip...

    Yan Wang, Yijun Chen, Junpeng Gao, Haoling **e, Yuqing Guo, **gwei Yang in Cell Discovery (2024)

  4. No Access

    Article

    Effects of a 12-week exercise-based intervention on weight management in overweight or obese breast cancer survivors: a randomized controlled trial

    Breast cancer survivors face dual challenges: long-term sequelae of treatment and the risk of recurrent disease. Furthermore, obesity and a sedentary lifestyle can complicate both challenges. We aimed to asses...

    Fu-Yun Zhao, Jun-E Liu, **ao-Ming Fang, Lu Chen, Jia-Gui Liang in Supportive Care in Cancer (2024)

  5. No Access

    Article

    scNanoHi-C: a single-cell long-read concatemer sequencing method to reveal high-order chromatin structures within individual cells

    The high-order three-dimensional (3D) organization of regulatory genomic elements provides a topological basis for gene regulation, but it remains unclear how multiple regulatory elements across the mammalian ...

    Wen Li, Jiansen Lu, ** Lu, Yun Gao, Yichen Bai, Kexuan Chen, **njie Su in Nature Methods (2023)

  6. No Access

    Article

    Effects of polysaccharides on the hydrodynamic parameters of sheet erosion on loessial slopes

    The variations in hydrodynamic parameters at different polysaccharides rates and the relationships between sheet erosion modulus and hydrodynamic parameters were analyzed to reveal the hydrodynamic mechanism o...

    Liting Yang, Jun’e Liu, **aoqian Qi in Environmental Science and Pollution Resear… (2022)

  7. No Access

    Article

    Object recognition algorithm based on optimized nonlinear activation function-global convolutional neural network

    Traditional object recognition algorithms cannot meet the requirements of object recognition accuracy in the actual warehousing and logistics field. In recent years, the rapid development of the deep learning ...

    Feng-** An, Jun-e Liu, Lei Bai in The Visual Computer (2022)

  8. No Access

    Article

    Remote sensing image classification algorithm based on ridge wave sparse collaborative representation convolutional neural network

    Remote sensing image classification is a crucial link when processing remote sensing images. Through classification, remote sensing images are converted into classified features that can be understood and proc...

    Feng** An, Jun-e Liu in Multimedia Tools and Applications (2021)

  9. No Access

    Article

    Development and validation of a nomogram to predict the risk of breast cancer-related lymphedema among Chinese breast cancer survivors

    Breast cancer-related lymphedema (BCRL) is a major long-term complication for post-surgery breast cancer survivors. Although several risk factors have been identified, lifestyle characteristics have been negle...

    Yan-fei Liu, Jun-E Liu, Yi Zhu, Yim Wah Mak, Hui Qiu in Supportive Care in Cancer (2021)

  10. Article

    Open Access

    m6Am-seq reveals the dynamic m6Am methylation in the human transcriptome

    N6,2′-O-dimethyladenosine (m6Am), a terminal modification adjacent to the mRNA cap, is a newly discovered reversible RNA modification. Yet, a specific and sensitive tool to directly map transcriptome-wide m6Am is...

    Hanxiao Sun, Kai Li, **aoting Zhang, Jun’e Liu, Meiling Zhang in Nature Communications (2021)

  11. Article

    Open Access

    Tissue-specific 5-hydroxymethylcytosine landscape of the human genome

    5-Hydroxymethylcytosine (5hmC) is an important epigenetic mark that regulates gene expression. Charting the landscape of 5hmC in human tissues is fundamental to understanding its regulatory functions. Here, we...

    Bo He, Chao Zhang, **aoxue Zhang, Yu Fan, Hu Zeng, Jun’e Liu in Nature Communications (2021)

  12. Article

    Open Access

    The m6A methylome of SARS-CoV-2 in host cells

    The newly identified Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has resulted in a global health emergency because of its rapid spread and high mortality. The molecular mechanism of interactio...

    Jun’e Liu, Yan-Peng Xu, Kai Li, Qing Ye, Hang-Yu Zhou, Hanxiao Sun in Cell Research (2021)

  13. No Access

    Article

    Medical image segmentation algorithm based on multilayer boundary perception-self attention deep learning model

    Traditional medical image segmentation methods have problems such as low segmentation accuracy and low adaptive ability. Therefore, many scholars have proposed a medical image segmentation method based on deep...

    Feng-** An, Jun-e Liu in Multimedia Tools and Applications (2021)

  14. No Access

    Article

    Breast Cancer Survivors Report Similar Concerns Related to Return to Work in Developed and Develo** Nations

    Aim To determine whether breast cancer survivors (BCS) at work following the diagnosis and/or treatment of breast cancer, in a rapidly develo** country such as China experience similar to return to work challen...

    Shi-**ang Luo, Jun-E Liu, Andy S. K. Cheng in Journal of Occupational Rehabilitation (2019)

  15. No Access

    Article

    Additive-multiplicative hazards model for case-cohort studies with multiple disease outcomes

    Case-cohort design is an efficient and economical design to study risk factors for diseases with expensive measurements, especially when the disease rate is low. When several diseases are of interest, multiple...

    Jun-e Liu, Jie Zhou in Acta Mathematicae Applicatae Sinica, English Series (2017)

  16. No Access

    Chapter and Conference Paper

    Hierarchical Attribute-Set Based Encryption for Scalable, Flexible and Fine-Grained Access Control in Cloud Computing

    Cloud computing has emerged as the most influential paradigm in recent years. The new computing technology requires users to entrust their data to the cloud provider, which leads to security issues on the outs...

    Jun’e Liu, Zhiguo Wan, Ming Gu in Information Security Practice and Experience (2011)