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Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators

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  1. Article

    Open Access

    Collection of Macaca fascicularis cDNAs derived from bone marrow, kidney, liver, pancreas, spleen, and thymus

    Consolidating transcriptome data of non-human primates is essential to annotate primate genome sequences, and will facilitate research using non-human primates in the genomic era. Macaca fascicularis is a macaque...

    Naoki Osada, Makoto Hirata, Reiko Tanuma, Yutaka Suzuki, Sumio Sugano in BMC Research Notes (2009)

  2. Article

    Open Access

    Extensive expansion and diversification of the chemokine gene family in zebrafish: Identification of a novel chemokine subfamily CX

    The chemokine family plays important roles in cell migration and activation. In humans, at least 44 members are known. Based on the arrangement of the four conserved cysteine residues, chemokines are now class...

    Hisayuki Nomiyama, Kunio Hieshima, Naoki Osada, Yoko Kato-Unoki in BMC Genomics (2008)

  3. Article

    Open Access

    Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta

    Cynomolgus macaques (Macaca fascicularis) are widely used as experimental animals in biomedical research and are closely related to other laboratory macaques, such as rhesus macaques (M. mulatta). We isolated 85,...

    Naoki Osada, Katsuyuki Hashimoto, Yosuke Kameoka, Makoto Hirata in BMC Genomics (2008)

  4. Article

    Open Access

    Cynomolgus monkey testicular cDNAs for discovery of novel human genes in the human genome sequence

    In order to contribute to the establishment of a complete map of transcribed regions of the human genome, we constructed a testicular cDNA library for the cynomolgus monkey, and attempted to find novel transcr...

    Naoki Osada, Munetomo Hida, Jun Kusuda, Reiko Tanuma, Makoto Hirata in BMC Genomics (2002)

  5. Article

    Prediction of unidentified human genes on the basis of sequence similarity to novel cDNAs from cynomolgus monkey brain

    The complete assignment of the protein-coding regions of the human genome is a major challenge for genome biology today. We have already isolated many hitherto unknown full-length cDNAs as orthologs of unident...

    Naoki Osada, Munetomo Hida, Jun Kusuda, Reiko Tanuma, Makoto Hirata in Genome Biology (2001)