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  1. No Access

    Article

    Comprehensive whole-genome sequence analyses provide insights into the genomic architecture of cerebral palsy

    We performed whole-genome sequencing (WGS) in 327 children with cerebral palsy (CP) and their biological parents. We classified 37 of 327 (11.3%) children as having pathogenic/likely pathogenic (P/LP) variants...

    Darcy L. Fehlings, Mehdi Zarrei, Worrawat Engchuan, Neal Sondheimer in Nature Genetics (2024)

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    Chapter

    Grand Strategies and Everyday Struggles Under the New Cold War and COVID-19: A Sociological Political Economy

    The ongoing geopolitical tensions and conflicts between China on various fronts including trade, technology, and have marked an ” (or “Warm War”) in the current global superpower competition between a rap...

    John Wei in Asia in the Old and New Cold Wars (2023)

  3. Article

    Open Access

    Genomic imbalances in the placenta are associated with poor fetal growth

    Fetal growth restriction (FGR) is associated with increased risks for complications before, during, and after birth, in addition to risk of disease through to adulthood. Although placental insufficiency, failu...

    Giulia F. Del Gobbo, Yue Yin, Sanaa Choufani, Emma A. Butcher in Molecular Medicine (2021)

  4. Article

    Open Access

    A large data resource of genomic copy number variation across neurodevelopmental disorders

    Copy number variations (CNVs) are implicated across many neurodevelopmental disorders (NDDs) and contribute to their shared genetic etiology. Multiple studies have attempted to identify shared etiology among N...

    Mehdi Zarrei, Christie L. Burton, Worrawat Engchuan, Edwin J. Young in npj Genomic Medicine (2019)

  5. Article

    Open Access

    Impact of IQ on the diagnostic yield of chromosomal microarray in a community sample of adults with schizophrenia

    Schizophrenia is a severe psychiatric disorder associated with IQ deficits. Rare copy number variations (CNVs) have been established to play an important role in the etiology of schizophrenia. Several of the l...

    Chelsea Lowther, Daniele Merico, Gregory Costain, Jack Waserman in Genome Medicine (2017)

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    Article

    Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder

    Yuen et al. developed a cloud-based database with 5,205 whole genomes from families with autism spectrum disorder (ASD). They identified 18 new candidate ASD-risk genes and approximately 100 risk genes and copy-n...

    Ryan K C Yuen, Daniele Merico, Matt Bookman, Jennifer L Howe in Nature Neuroscience (2017)

  7. Article

    Open Access

    Clinically relevant copy number variations detected in cerebral palsy

    Cerebral palsy (CP) represents a group of non-progressive clinically heterogeneous disorders that are characterized by motor impairment and early age of onset, frequently accompanied by co-morbidities. The cau...

    Maryam Oskoui, Matthew J. Gazzellone, Bhooma Thiruvahindrapuram in Nature Communications (2015)

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    Article

    Screening for Prostate Cancer—Beyond Total PSA, Utilization of Novel Biomarkers

    Urology has been beset by several major trends that have shifted the entire paradigm for prostate cancer screening. These stem from a backlash against overdiagnosis and overtreatment due to prostate-specific a...

    Todd Morgan, Ganesh Palapattu, John Wei in Current Urology Reports (2015)

  9. Article

    Open Access

    Copy number variation in Han Chinese individuals with autism spectrum disorder

    Autism spectrum disorders (ASDs) are a group of neurodevelopmental conditions with a demonstrated genetic etiology. Rare (<1% frequency) copy number variations (CNVs) account for a proportion of the genetic ev...

    Matthew J Gazzellone, Xue Zhou, Anath C Lionel in Journal of Neurodevelopmental Disorders (2014)

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    Article

    Regulation of the immune response by soybean isoflavones

    Soybeans are rich in immuno-modulatory isoflavones such as genistein, daidzein, and glycitein. These isoflavones are well-known antioxidants, chemopreventive and anti-inflammatory agents. Several epidemiologic...

    Madhan Masilamani, John Wei, Hugh A. Sampson in Immunologic Research (2012)

  11. Article

    Open Access

    Towards a comprehensive structural variation map of an individual human genome

    Several genomes have now been sequenced, with millions of genetic variants annotated. While significant progress has been made in map** single nucleotide polymorphisms (SNPs) and small (<10 bp) insertion/del...

    Andy W Pang, Jeffrey R MacDonald, Dalila Pinto, John Wei in Genome Biology (2010)

  12. No Access

    Article

    Origins and functional impact of copy number variation in the human genome

    Structural variations of DNA greater than 1 kilobase in size account for most bases that vary among human genomes, but are still relatively under-ascertained. Here we use tiling oligonucleotide microarrays, co...

    Donald F. Conrad, Dalila Pinto, Richard Redon, Lars Feuk, Omer Gokcumen in Nature (2010)

  13. Article

    Open Access

    Evolutionary implications of inversions that have caused intra-strand parity in DNA

    Chargaff's rule of DNA base composition, stating that DNA comprises equal amounts of adenine and thymine (%A = %T) and of guanine and cytosine (%C = %G), is well known because it was fundamental to the concept...

    Kohji Okamura, John Wei, Stephen W Scherer in BMC Genomics (2007)

  14. No Access

    Article

    Physical activity in women planning sacrocolpopexy

    This study describes preoperative physical activity in 314 stress-continent women with prolapse planning sacrocolpopexy. Seventy-six percent reported that they engaged in mild, 60% in moderate, and 26% in stre...

    Ingrid Nygaard, Vicki Handa, Linda Brubaker in International Urogynecology Journal (2007)

  15. No Access

    Article

    Genome assembly comparison identifies structural variants in the human genome

    Numerous types of DNA variation exist, ranging from SNPs to larger structural alterations such as copy number variants (CNVs) and inversions. Alignment of DNA sequence from different sources has been used to i...

    Razi Khaja, Junjun Zhang, Jeffrey R MacDonald, Yongshu He in Nature Genetics (2006)

  16. No Access

    Article

    Development of the Measure of Adaptations for Pelvic Symptoms (MAPS): the Importance of Incorporating the Female Patient’s Voice

    Women with pelvic floor disorders use many adaptations in an attempt to minimize symptoms and enhance the quality of their lives. Existing condition-specific measures fail to capture the extent or impact of th...

    Patricia A. Wren, Nancy K. Janz, Linda Brubaker in Applied Research in Quality of Life (2006)

  17. No Access

    Article

    The role of prostate specific antigen in screening and management of clinically localized prostate cancer

    Khurshid Gurui, Ashutosh Tewari, Ashok K. Hemal in International Urology and Nephrology (2003)