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  1. Article

    Open Access

    Paired single-cell multi-omics data integration with Mowgli

    The profiling of multiple molecular layers from the same set of cells has recently become possible. There is thus a growing need for multi-view learning methods able to jointly analyze these data. We here pres...

    Geert-Jan Huizing, Ina Maria Deutschmann, Gabriel Peyré in Nature Communications (2023)

  2. Article

    Open Access

    Disentangling temporal associations in marine microbial networks

    Microbial interactions are fundamental for Earth’s ecosystem functioning and biogeochemical cycling. Nevertheless, they are challenging to identify and remain barely known. Omics-based censuses are helpful in ...

    Ina Maria Deutschmann, Anders K. Krabberød, Francisco Latorre, Erwan Delage in Microbiome (2023)

  3. Article

    Open Access

    Correction to: Disentangling environmental effects in microbial association networks

    Ina Maria Deutschmann, Gipsi Lima-Mendez, Anders K. Krabberød, Jeroen Raes in Microbiome (2021)

  4. Article

    Open Access

    Disentangling environmental effects in microbial association networks

    Ecological interactions among microorganisms are fundamental for ecosystem function, yet they are mostly unknown or poorly understood. High-throughput-omics can indicate microbial interactions through associat...

    Ina Maria Deutschmann, Gipsi Lima-Mendez, Anders K. Krabberød, Jeroen Raes in Microbiome (2021)

  5. No Access

    Article

    On the information content of discrete phylogenetic characters

    Phylogenetic inference aims to reconstruct the evolutionary relationships of different species based on genetic (or other) data. Discrete characters are a particular type of data, which contain information on ...

    Magnus Bordewich, Ina Maria Deutschmann, Mareike Fischer in Journal of Mathematical Biology (2018)