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  1. Chapter

    Consistent and Quality-Aware Service Composition in Smart Cities

    In this chapter, we review our research for dependable service composition for smart cities in both cyber and physical spaces. For the cyber space, given the active investigation on web services or web APIs, w...

    Fuyuki Ishikawa in Human-Centered Services Computing for Smart Cities (2024)

  2. Article

    Open Access

    Author Correction: The interferon stimulated gene-encoded protein HELZ2 inhibits human LINE-1 retrotransposition and LINE-1 RNA-mediated type I interferon induction

    Ahmad Luqman-Fatah, Yuzo Watanabe, Kazuko Uno, Fuyuki Ishikawa in Nature Communications (2023)

  3. Article

    Open Access

    The interferon stimulated gene-encoded protein HELZ2 inhibits human LINE-1 retrotransposition and LINE-1 RNA-mediated type I interferon induction

    Some interferon stimulated genes (ISGs) encode proteins that inhibit LINE-1 (L1) retrotransposition. Here, we use immunoprecipitation followed by liquid chromatography-tandem mass spectrometry to identify prot...

    Ahmad Luqman-Fatah, Yuzo Watanabe, Kazuko Uno, Fuyuki Ishikawa in Nature Communications (2023)

  4. No Access

    Chapter and Conference Paper

    Formal Modelling of Safety Architecture for Responsibility-Aware Autonomous Vehicle via Event-B Refinement

    Ensuring the safety of autonomous vehicles (AVs) is the key requisite for their acceptance in society. This complexity is the core challenge in formally proving their safety conditions with AI-based black-box ...

    Tsutomu Kobayashi, Martin Bondu, Fuyuki Ishikawa in Formal Methods (2023)

  5. No Access

    Chapter and Conference Paper

    Towards Requirements Engineering for Digital Twins of Cyber-Physical Systems

    Digital twins (DTs) are promising to revolutionize the way future Cyber-Physical Systems (CPSs) – which are becoming increasingly complex every day– will be developed and operated. To deal with such increasing...

    Tao Yue, Shaukat Ali, Paolo Arcaini in Leveraging Applications of Formal Methods,… (2022)

  6. No Access

    Chapter

    To G0 or Not to G0: Cell Cycle Paradox in Senescence and Brain Aging

    Organisms can cope with ever-changing environments by inducing various adaptive responses that increase fitness. is a stress-activated program characterized by the irreversible arrest of the in damaged, pr...

    Shoma Ishikawa, Fuyuki Ishikawa in Aging Mechanisms II (2022)

  7. Article

    Open Access

    A refinement-based development of a distributed signalling system

    The decentralised railway signalling systems have a potential to increase capacity, availability and reduce maintenance costs of railway networks. However, given the safety-critical nature of railway signallin...

    Paulius Stankaitis, Alexei Iliasov, Tsutomu Kobayashi in Formal Aspects of Computing (2021)

  8. No Access

    Chapter and Conference Paper

    Experimental Conformance Evaluation onUBER ATG Safety Case Framework withANSI/UL 4600

    The safety of Self-Driving Vehicles (SDVs) is crucial for social acceptance of self-driving technology/vehicles, and how to assure such safety is of great concern for automakers and regulatory and standardizat...

    Kenji Taguchi, Fuyuki Ishikawa in Computer Safety, Reliability, and Security… (2021)

  9. No Access

    Chapter and Conference Paper

    Robustifying Controller Specifications of Cyber-Physical Systems Against Perceptual Uncertainty

    Formal reasoning on the safety of controller systems interacting with plants is complex because developers need to specify behavior while taking into account perceptual uncertainty. To address this, we propose...

    Tsutomu Kobayashi, Rick Salay, Ichiro Hasuo, Krzysztof Czarnecki in NASA Formal Methods (2021)

  10. No Access

    Chapter and Conference Paper

    Architecture-Guided Test Resource Allocation via Logic

    We introduce a new logic named Quantitative Confidence Logic (QCL) that quantifies the level of confidence one has in the conclusion of a proof. By translating a fault tree representing a system’s architecture...

    Clovis Eberhart, Akihisa Yamada, Stefan Klikovits, Shin-ya Katsumata in Tests and Proofs (2021)

  11. No Access

    Chapter

    Explicit Exploration of Refinement Design in Proof-Based Approach: Refinement Engineering in Event-B

    Control of abstraction levels is key to tackling the increasing complexity of emerging systems such as cyber-physical systems. Formal methods for dependability assurance have been used to explore this point by...

    Fuyuki Ishikawa, Tsutomu Kobayashi in Implicit and Explicit Semantics Integratio… (2021)

  12. Article

    Editorial to the theme section on model-based engineering of smart systems

    John Fitzgerald, Fuyuki Ishikawa, Peter Gorm Larsen in Software and Systems Modeling (2020)

  13. No Access

    Chapter and Conference Paper

    Embedding Approximation in Event-B: Safe Hybrid System Design Using Proof and Refinement

    Hybrid systems consist of a discrete part (controller) that interacts with a continuous physical part (plant). Formal verification of such systems is complex and challenging in order to handle both the discret...

    Guillaume Dupont, Yamine Aït-Ameur in Formal Methods and Software Engineering (2020)

  14. Chapter and Conference Paper

    Formal Distributed Protocol Development for Reservation of Railway Sections

    The decentralisation of railway signalling systems has the potential to increase railway network capacity, availability and reduce maintenance costs. Given the safety-critical nature of railway signalling and ...

    Paulius Stankaitis, Alexei Iliasov, Tsutomu Kobayashi in Rigorous State-Based Methods (2020)

  15. No Access

    Article

    Consistency-preserving refactoring of refinement structures in Event-B models

    Event-B has been attracting much interest because it supports a flexible refinement mechanism that reduces the complexity of constructing and verifying models of complicated target systems by taking into accou...

    Tsutomu Kobayashi, Fuyuki Ishikawa, Shinichi Honiden in Formal Aspects of Computing (2019)

  16. No Access

    Chapter and Conference Paper

    Tackling Uncertainty in Safety Assurance for Machine Learning: Continuous Argument Engineering with Attributed Tests

    There are unique kinds of uncertainty in implementations constructe...

    Yutaka Matsuno, Fuyuki Ishikawa in Computer Safety, Reliability, and Security (2019)

  17. Article

    Open Access

    Time-Series Analysis of Tumorigenesis in a Murine Skin Carcinogenesis Model

    Recent years have witnessed substantial progress in understanding tumor heterogeneity and the process of tumor progression; however, the entire process of the transition of tumors from a benign to metastatic s...

    Yoshimasa Aoto, Kazuhiro Okumura, Tsuyoshi Hachiya, Sumitaka Hase in Scientific Reports (2018)

  18. No Access

    Chapter and Conference Paper

    Concepts in Quality Assessment for Machine Learning - From Test Data to Arguments

    There have been active efforts to use machine learning (ML) techniques for the development of smart systems, e.g., driving support systems with image recognition. However, the behavior of ML components, e.g., ...

    Fuyuki Ishikawa in Conceptual Modeling (2018)

  19. No Access

    Chapter and Conference Paper

    Continuous Argument Engineering: Tackling Uncertainty in Machine Learning Based Systems

    Components or systems implemented by using machine learning techniques have intrinsic difficulties caused by uncertainty. Specifically, it is impossible to logically or deductively conclude what they can(not) ...

    Fuyuki Ishikawa, Yutaka Matsuno in Computer Safety, Reliability, and Security (2018)

  20. No Access

    Chapter and Conference Paper

    Analysis on Strategies of Superposition Refinement of Event-B Specifications

    The superposition refinement with the Event-B modeling method is useful because it supports construction of models in multiple abstraction levels, and thus mitigates the burden of constructing rigorous models....

    Tsutomu Kobayashi, Fuyuki Ishikawa in Formal Methods and Software Engineering (2018)

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