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Open AccessAuthor Correction: Lipid exposure activates gene expression changes associated with estrogen receptor negative breast cancer
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Open AccessLipid exposure activates gene expression changes associated with estrogen receptor negative breast cancer
Improved understanding of local breast biology that favors the development of estrogen receptor negative (ER−) breast cancer (BC) would foster better prevention strategies. We have previously shown that overex...
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Article
Open AccessPrediction of functional microexons by transfer learning
Microexons are a particular kind of exon of less than 30 nucleotides in length. More than 60% of annotated human microexons were found to have high levels of sequence conservation, suggesting their potential f...
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Article
Nonlinear relationship between chromatin accessibility and estradiol-regulated gene expression
Chromatin accessibility is central to basal and inducible gene expression. Through ATAC-seq experiments in estrogen receptor-positive (ER+) breast cancer cell line MCF-7 and integration with multi-omics data, ...
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Article
Open AccessImproving alignment accuracy on homopolymer regions for semiconductor-based sequencing technologies
Ion Torrent and Ion Proton are semiconductor-based sequencing technologies that feature rapid sequencing speed and low upfront and operating costs, thanks to the avoidance of modified nucleotides and optical m...