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  1. Article

    Open Access

    ENVirT: inference of ecological characteristics of viruses from metagenomic data

    Estimating the parameters that describe the ecology of viruses,particularly those that are novel, can be made possible using metagenomic approaches. However, the best-performing existing methods require databa...

    Duleepa Jayasundara, Damayanthi Herath, Damith Senanayake in BMC Bioinformatics (2019)

  2. Article

    Open Access

    Accurate reconstruction of viral quasispecies spectra through improved estimation of strain richness

    Estimating the number of different species (richness) in a mixed microbial population has been a main focus in metagenomic research. Existing methods of species richness estimation ride on the assumption that the...

    Duleepa Jayasundara, I Saeed, BC Chang, Sen-Lin Tang in BMC Bioinformatics (2015)