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    Article

    c-Jun overexpression in CAR T cells induces exhaustion resistance

    Chimeric antigen receptor (CAR) T cells mediate anti-tumour effects in a small subset of patients with cancer13, but dysfunction due to T cell exhaustion is an important barrier to progress46. To investigate th...

    Rachel C. Lynn, Evan W. Weber, Elena Sotillo, David Gennert, Peng Xu in Nature (2019)

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    Spatial reconstruction of single-cell gene expression data

    RNA-seq data from single cells are mapped to their location in complex tissues using gene expression atlases based on in situ hybridization.

    Rahul Satija, Jeffrey A Farrell, David Gennert, Alexander F Schier in Nature Biotechnology (2015)

  3. Article

    Erratum: Deconstructing transcriptional heterogeneity in pluripotent stem cells

    Nature 516, 56–61 (2014); doi:10.1038/nature13920 In this Letter, owing to a production error, in Fig. 3e the sixth bar from the left was inadvertently labelled ‘Dgcr8−/− FF’ instead of ‘Dicer−/− FF’. This has...

    Roshan M. Kumar, Patrick Cahan, Alex K. Shalek, Rahul Satija, A. Jay DaleyKeyser in Nature (2015)

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    Article

    Deconstructing transcriptional heterogeneity in pluripotent stem cells

    Pluripotent stem cells (PSCs) are capable of dynamic interconversion between distinct substates; however, the regulatory circuits specifying these states and enabling transitions between them are not well unde...

    Roshan M. Kumar, Patrick Cahan, Alex K. Shalek, Rahul Satija, A. Jay DaleyKeyser in Nature (2014)

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    Article

    Dynamic regulatory network controlling TH17 cell differentiation

    Despite their importance, the molecular circuits that control the differentiation of naive T cells remain largely unknown. Recent studies that reconstructed regulatory networks in mammalian cells have focused ...

    Nir Yosef, Alex K. Shalek, Jellert T. Gaublomme, Hulin **, You** Lee in Nature (2013)