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  1. Article

    Open Access

    Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2

    As the global burden of SARS-CoV-2 infections escalates, so does the evolution of viral variants with increased transmissibility and pathology. In addition to this entrenched diversity, RNA viruses can also di...

    Kapil Gupta, Christine Toelzer, Maia Kavanagh Williamson in Nature Communications (2022)

  2. No Access

    Article

    Virus genomes reveal factors that spread and sustained the Ebola epidemic

    The 2013–2016 West African epidemic caused by the Ebola virus was of unprecedented magnitude, duration and impact. Here we reconstruct the dispersal, proliferation and decline of Ebola virus throughout the reg...

    Gytis Dudas, Luiz Max Carvalho, Trevor Bedford, Andrew J. Tatem, Guy Baele in Nature (2017)

  3. Article

    Open Access

    A comparison of host gene expression signatures associated with infection in vitro by the Makona and Ecran (Mayinga) variants of Ebola virus

    The Ebola virus (EBOV) variant Makona (which emerged in 2013) was the causative agent of the largest outbreak of Ebola Virus Disease recorded. Differences in virus-host interactions between viral variants have...

    Andrew Bosworth, Stuart D. Dowall, Isabel Garcia-Dorival in Scientific Reports (2017)

  4. No Access

    Article

    Real-time, portable genome sequencing for Ebola surveillance

    A nanopore DNA sequencer is used for real-time genomic surveillance of the Ebola virus epidemic in the field in Guinea; the authors demonstrate that it is possible to pack a genomic surveillance laboratory in ...

    Joshua Quick, Nicholas J. Loman, Sophie Duraffour, Jared T. Simpson in Nature (2016)

  5. Article

    Open Access

    Temporal and spatial analysis of the 2014–2015 Ebola virus outbreak in West Africa

    Analysis of 179 new Ebola virus sequences from patient samples collected in Guinea between March 2014 and January 2015 shows how different lineages evolved and spread in West Africa.

    Miles W. Carroll, David A. Matthews, Julian A. Hiscox, Michael J. Elmore in Nature (2015)