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  1. Article

    Open Access

    Ganciclovir-induced mutations are present in a diverse spectrum of post-transplant malignancies

    Ganciclovir (GCV) is widely used in solid organ and haematopoietic stem cell transplant patients for prophylaxis and treatment of cytomegalovirus. It has long been considered a mutagen and carcinogen. However,...

    Hu Fang, Helen H. N. Yan, Rebecca A. Bilardi, Christoffer Flensburg in Genome Medicine (2022)

  2. Article

    Open Access

    Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing

    A modified Chromium 10x droplet-based protocol that subsamples cells for both short-read and long-read (nanopore) sequencing together with a new computational pipeline (FLAMES) is developed to enable isoform disc...

    Luyi Tian, Jafar S. Jabbari, Rachel Thijssen, Quentin Gouil in Genome Biology (2021)

  3. Article

    Open Access

    Finding a suitable library size to call variants in RNA-Seq

    RNA sequencing allows the study of both gene expression changes and transcribed mutations, providing a highly effective way to gain insight into cancer biology. When planning the sequencing of a large cohort o...

    Anna Quaglieri, Christoffer Flensburg, Terence P. Speed in BMC Bioinformatics (2020)

  4. No Access

    Article

    Exclusive final states in diffractive excitation

    In this paper we describe a formalism for generating exclusive final states in diffractive excitation, based on the optical analogy where diffraction is fully determined by the absorption into inelastic channe...

    Christoffer Flensburg, Gösta Gustafson, Leif Lönnblad in Journal of High Energy Physics (2012)

  5. Article

    Open Access

    Inclusive and exclusive observables from dipoles in high energy collisions

    We present a new model for simulating exclusive final states in minimum-bias collisions between hadrons.

    Christoffer Flensburg, Gösta Gustafson, Leif Lönnblad in Journal of High Energy Physics (2011)

  6. Article

    Open Access

    Correlations in double parton distributions at small x

    We present a dynamical study of the double parton distribution in impact parameter space, which enters into the double scattering cross section in hadronic collisions. This distribution is analogous to the gen...

    Christoffer Flensburg, Gösta Gustafson, Leif Lönnblad in Journal of High Energy Physics (2011)

  7. No Access

    Article

    Fluctuations, saturation, and diffractive excitation in high energy collisions

    Diffractive excitation is usually described by the Good-Walker formalism for low masses, and by the triple-Regge formalism for high masses. In the Good-Walker formalism the cross section is determined by the f...

    Christoffer Flensburg, Gösta Gustafson in Journal of High Energy Physics (2010)

  8. No Access

    Article

    Elastic and quasi-elastic pp and γ p scattering in the dipole model

    We have in earlier papers presented an extension of Mueller’s dipole cascade model, which includes sub-leading effects from energy conservation and running coupling as well as color-suppressed saturation effec...

    Christoffer Flensburg, Gösta Gustafson, Leif Lönnblad in The European Physical Journal C (2009)