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  1. Article

    Open Access

    quantms: a cloud-based pipeline for quantitative proteomics enables the reanalysis of public proteomics data

    The volume of public proteomics data is rapidly increasing, causing a computational challenge for large-scale reanalysis. Here, we introduce quantms (https://quant,ms.org/

    Chengxin Dai, Julianus Pfeuffer, Hong Wang, ** Zheng, Lukas Käll in Nature Methods (2024)

  2. Article

    Open Access

    Knockdown of FOXA1 enhances the osteogenic differentiation of human bone marrow mesenchymal stem cells partly via activation of the ERK1/2 signalling pathway

    The available therapeutic options for large bone defects remain extremely limited, requiring new strategies to accelerate bone healing. Genetically modified bone mesenchymal stem cells (BMSCs) with enhanced os...

    Lijun Li, Yibo Wang, Zhongxiang Wang, Deting Xue in Stem Cell Research & Therapy (2022)

  3. Article

    Open Access

    Aucubin promotes bone-fracture healing via the dual effects of anti-oxidative damage and enhancing osteoblastogenesis of hBM-MSCs

    Aucubin (AU), an iridoid glucoside isolated from many traditional herbal medicines, has anti-osteoporosis and anti-apoptosis bioactivities. However, the effect of AU on the treatment of bone-fracture remains u...

    Kanbin Wang, Chengwei Zhou, Lijun Li, Chengxin Dai in Stem Cell Research & Therapy (2022)

  4. Article

    Open Access

    A proteomics sample metadata representation for multiomics integration and big data analysis

    The amount of public proteomics data is rapidly increasing but there is no standardized format to describe the sample metadata and their relationship with the dataset files in a way that fully supports their u...

    Chengxin Dai, Anja Füllgrabe, Julianus Pfeuffer in Nature Communications (2021)