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  1. No Access

    Chapter and Conference Paper

    Transcriptional Response of SK-N-AS Cells to Methamidophos (Extended Abstract)

    Transcriptomics response of SK-N-AS cells to methamidophos (an acetylcholine esterase inhibitor) exposure was measured at 10 time points between 0.5 and 48 h. The data was analyzed using a combination of trad...

    Akos Vertes, Albert-Baskar Arul, Peter Avar in Computational Methods in Systems Biology (2019)

  2. No Access

    Chapter and Conference Paper

    Inferring Mechanism of Action of an Unknown Compound from Time Series Omics Data

    Identifying the mechanism of action (MoA) of an unknown, possibly novel, substance (chemical, protein, or pathogen) is a significant challenge. Biologists typically spend years working out the MoA for known co...

    Akos Vertes, Albert-Baskar Arul, Peter Avar in Computational Methods in Systems Biology (2018)

  3. Article

    Editorial

    Olivier Danvy, Carolyn L. Talcott in Higher-Order and Symbolic Computation (2009)

  4. Article

    Editorial

    Olivier Danvy, Carolyn L. Talcott in Higher-Order and Symbolic Computation (2009)

  5. Article

    Editorial

    Olivier Danvy, Carolyn L. Talcott in Higher-Order and Symbolic Computation (2009)

  6. Article

    Open Access

    Integrated analysis of breast cancer cell lines reveals unique signaling pathways

    Cancer is a heterogeneous disease resulting from the accumulation of genetic defects that negatively impact control of cell division, motility, adhesion and apoptosis. Deregulation in signaling along the EgfR-...

    Laura M Heiser, Nicholas J Wang, Carolyn L Talcott, Keith R Laderoute in Genome Biology (2009)

  7. No Access

    Article

    Specification and analysis of the AER/NCA active network protocol suite in Real-Time Maude

    This paper describes the application of the Real-Time Maude tool and the Maude formal methodology to the specification and analysis of the AER/NCA suite of active network multicast protocol components. Because...

    Peter Csaba Ölveczky, José Meseguer, Carolyn L. Talcott in Formal Methods in System Design (2006)

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    Article

    Specification Diagrams for Actor Systems

    Specification diagrams (SD's) are a novel form of graphical notation for specifying open distributed object systems. The design goal is to define notation for specifying message-passing behavior that is expres...

    Scott F. Smith, Carolyn L. Talcott in Higher-Order and Symbolic Computation (2002)

  9. No Access

    Book and Conference Proceedings

    Formal Methods for Open Object-Based Distributed Systems IV

    IFIP TC6/WG6.1. Fourth International Conference on Formal Methods for Open Object-Based Distributed Systems (FMOODS 2000) September 6–8, 2000, Stanford, California, USA

    Scott F. Smith, Carolyn L. Talcott in IFIP Advances in Information and Communication Technology (2000)

  10. Chapter and Conference Paper

    Erratum to: Formal Methods for Open Object-Based Distributed Systems IV

    Erratum to: S.F. Smith and C.L. Talcott (Eds.) Formal Methods for Open Object-Based Distributed Systems IV DOI: 10.1007/978-0-387-35520-7

    Scott F. Smith, Carolyn L. Talcott in Formal Methods for Open Object-Based Distr… (2000)

  11. No Access

    Chapter and Conference Paper

    Towards a Toolkit for Actor System Specification

    This paper represents a first step towards develo** a toolkit for modular reasoning about components of object-based open distributed systems. Our starting point is the actor theory framework [10],[11], a gener...

    Carolyn L. Talcott in Algebraic Methodology and Software Technology (2000)

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    Chapter and Conference Paper

    Composing and Controlling Search in Reasoning Theories Using Map**s

    Reasoning theories can be used to specify heterogeneous reasoning systems. In this paper we present an equational version of reasoning theories, and we study their structuring and composition, and the use of a...

    Alessandro Coglio, Fausto Giunchiglia, José Meseguer in Frontiers of Combining Systems (2000)

  13. Chapter and Conference Paper

    Modular Reasoning for Actor Specification Diagrams

    Specification diagrams are a novel form of graphical notation for specifying open distributed object systems. The design goal is to define notation for specifying message-passing behavior that is expressive, i...

    Scott F. Smith, Carolyn L. Talcott in Formal Methods for Open Object-Based Distr… (1999)

  14. No Access

    Article

    Introduction

    Olivier Danvy, Carolyn L. Talcott in Higher-Order and Symbolic Computation (1998)

  15. No Access

    Article

    Composable Semantic Models for Actor Theories

    We are interested in develo** a semantic foundation that supports specifying, composing, and reasoning about components of open distributed systems. The actor model provides the basic elements for open distr...

    Carolyn L. Talcott in Higher-Order and Symbolic Computation (1998)

  16. No Access

    Article

    Using Abstract Resources to Control Reasoning

    Many formalisms for reasoning about knowing commit an agent to be logically omniscient. Logical omniscience is an unrealistic principle for us to use to build a real-world agent, since it commits the agent to ...

    Richard W. Weyhrauch, Marco Cadoli in Journal of Logic, Language and Information (1998)

  17. No Access

    Chapter and Conference Paper

    A semantics preserving actor translation

    In this paper we present two actor languages and a semantics preserving translation between them. The source of the translation is a high-level language that provides object-based programming abstractions. The...

    Ian A. Mason, Carolyn L. Talcott in Automata, Languages and Programming (1997)

  18. No Access

    Chapter and Conference Paper

    Composable semantic models for actor theories

    We define three semantic models for actor computation starting with a generalization to open systems of Clinger's event diagram model, and forming two abstractions: interaction diagrams and interaction paths. ...

    Carolyn L. Talcott in Theoretical Aspects of Computer Software (1997)

  19. Chapter and Conference Paper

    Formal verification of synchronous circuits based on string-functional semantics: The 7 paillet circuits in boyer-moore

    Since the beginning of time, the semantics of choice for synchronous circuits has been the finite state machine (FSM). Years of research on FSMs have provided many tools for the design and verification of sync...

    Alexandre Bronstein, Carolyn L. Talcott in Automatic Verification Methods for Finite … (1990)