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  1. Article

    Open Access

    A multiomics disease progression signature of low-risk ccRCC

    Clear cell renal cell carcinoma (ccRCC) is the most common renal cancer. Identification of ccRCC likely to progress, despite an apparent low risk at the time of surgery, represents a key clinical issue. From a...

    Philipp Strauss, Mariell Rivedal, Andreas Scherer, Øystein Eikrem in Scientific Reports (2022)

  2. Article

    Open Access

    AGAP2-AS1 as a prognostic biomarker in low-risk clear cell renal cell carcinoma patients with progressing disease

    Clear cell renal cell carcinoma (ccRCC) is the most common subtype of renal cancer and one of the most common cancers. While survival for localized ccRCC is good, the survival of metastatic disease is not, and...

    Sigrid Nakken, Øystein Eikrem, Hans-Peter Marti in Cancer Cell International (2021)

  3. Article

    Open Access

    Increased protein intake affects pro-opiomelanocortin (POMC) processing, immune function and IGF signaling in peripheral blood mononuclear cells of home-dwelling old subjects using a genome-wide gene expression approach

    Adequate protein intake among older adults is associated with better health outcomes such as immune function and metabolic regulation of skeletal muscle, but conflicting results make it difficult to define the...

    Gyrd O. Gjevestad, Kirsten B. Holven, Amanda Rundblad, Arnar Flatberg in Genes & Nutrition (2019)

  4. Article

    Open Access

    Fine needle aspirates of kidneys: a promising tool for RNA sequencing in native and transplanted kidneys

    Transcriptome analysis is emerging as emerging as a promising tool to enhance precision of diagnosis and monitoring in solid organ transplantation. Clinical progress has however been hampered by the current re...

    Øystein Eikrem, Tedd C. Walther, Arnar Flatberg, Vidar Beisvag in BMC Nephrology (2018)

  5. No Access

    Article

    Identification of dorsal–ventral hippocampal differentiation in neonatal rats

    The adult hippocampal formation (HF) is functionally, connectionally, and transcriptionally differentiated along the dorsal–ventral axis. At birth, the hippocampus appears shortened along its dorsal–ventral ax...

    Kally C. O’Reilly, Arnar Flatberg, Sobia Islam in Brain Structure and Function (2015)

  6. Article

    Open Access

    Intracellular growth of Mycobacterium avium subspecies and global transcriptional responses in human macrophages after infection

    Mycobacterium avium subsp. avium (Maa) and M. avium subsp. hominissuis (Mah) are environmental mycobacteria and significant opportunistic pathogens. Mycobacterium avium infections in humans and pigs are mainly du...

    Angelika Agdestein, Anya Jones, Arnar Flatberg, Tone B Johansen in BMC Genomics (2014)

  7. Article

    Open Access

    The duration of gastrin treatment affects global gene expression and molecular responses involved in ER stress and anti-apoptosis

    How cells decipher the duration of an external signal into different transcriptional outcomes is poorly understood. The hormone gastrin can promote a variety of cellular responses including proliferation, diff...

    Linn-Karina M Selvik, Christina S Fjeldbo, Arnar Flatberg in BMC Genomics (2013)

  8. Article

    Open Access

    A framework for significance analysis of gene expression data using dimension reduction methods

    The most popular methods for significance analysis on microarray data are well suited to find genes differentially expressed across predefined categories. However, identification of features that correlate wit...

    Lars Gidskehaug, Endre Anderssen, Arnar Flatberg, Bjørn K Alsberg in BMC Bioinformatics (2007)