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  1. Article

    Open Access

    Variant discovery in targeted resequencing using whole genome amplified DNA

    Next generation sequencing and advances in genomic enrichment technologies have enabled the discovery of the full spectrum of variants from common to rare alleles in the human population. The application of su...

    Amit R Indap, Regina Cole, Christina L Runge, Gabor T Marth in BMC Genomics (2013)

  2. Article

    Open Access

    The functional spectrum of low-frequency coding variation

    Rare coding variants constitute an important class of human genetic variation, but are underrepresented in current databases that are based on small population samples. Recent studies show that variants alteri...

    Gabor T Marth, Fuli Yu, Amit R Indap, Kiran Garimella, Simon Gravel in Genome Biology (2011)

  3. No Access

    Article

    Proportionally more deleterious genetic variation in European than in African populations

    The analysis of genome-wide patterns of variation in human populations can provide genetic evidence of patterns of human migration and adaptation across the world. Two contrasting papers in this issue illustra...

    Kirk E. Lohmueller, Amit R. Indap, Steffen Schmidt, Adam R. Boyko in Nature (2008)

  4. Article

    Open Access

    Analysis of concordance of different haplotype block partitioning algorithms

    Different classes of haplotype block algorithms exist and the ideal dataset to assess their performance would be to comprehensively re-sequence a large genomic region in a large population. Such data sets are ...

    Amit R Indap, Gabor T Marth, Craig A Struble, Peter Tonellato in BMC Bioinformatics (2005)