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  1. Article

    Open Access

    Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B

    Photoactivated phytochrome B (PHYB) binds to antagonistically acting PHYTOCHROME-INTERACTING transcription FACTORs (PIFs) to regulate hundreds of light responsive genes in Arabidopsis by promoting PIF degradation...

    Chan Yul Yoo, Jiangman He, Qing Sang, Yongjian Qiu, Lingyun Long in Nature Communications (2021)

  2. Article

    Open Access

    An optogenetic system to control membrane phospholipid asymmetry through flippase activation in budding yeast

    Lipid asymmetry in biological membranes is essential for various cell functions, such as cell polarity, cytokinesis, and apoptosis. P4-ATPases (flippases) are involved in the generation of such asymmetry. In Sacc...

    Tomomi Suzuki, Tetsuo Mioka, Kazuma Tanaka, Akira Nagatani in Scientific Reports (2020)

  3. Article

    Open Access

    Mechanism of early light signaling by the carboxy-terminal output module of Arabidopsis phytochrome B

    Plant phytochromes are thought to transduce light signals by mediating the degradation of phytochrome-interacting transcription factors (PIFs) through the N-terminal photosensory module, while the C-terminal m...

    Yongjian Qiu, Elise K. Pasoreck, Amit K. Reddy, Akira Nagatani in Nature Communications (2017)

  4. No Access

    Article

    Root hydrotropism is controlled via a cortex-specific growth mechanism

    Plants can acclimate by using tropisms to link the direction of growth to environmental conditions. Hydrotropism allows roots to forage for water, a process known to depend on abscisic acid (ABA) but whose mol...

    Daniela Dietrich, Lei Pang, Akie Kobayashi, John A. Fozard in Nature Plants (2017)

  5. No Access

    Article

    Tissue-specific regulation of flowering by photoreceptors

    Plants use various kinds of environmental signals to adjust the timing of the transition from the vegetative to reproductive phase (flowering). Since flowering at the appropriate time is crucial for plant repr...

    Motomu Endo, Takashi Araki, Akira Nagatani in Cellular and Molecular Life Sciences (2016)

  6. Article

    Open Access

    Inhibition of arabidopsis hypocotyl elongation by jasmonates is enhanced under red light in phytochrome B dependent manner

    Jasmonates are phytohormones derived from oxygenated fatty acids that regulate a broad range of plant defense and developmental processes. In Arabidopsis, hypocotyl elongation under various light conditions wa...

    **g Chen, Kohei Sonobe, Narihito Ogawa, Shinji Masuda in Journal of Plant Research (2013)

  7. No Access

    Chapter

    Functions of Different Domains of Phytochrome

    Phytochrome is a photoreceptor regulating various aspects of plant photomorphogenesis. Phytochrome affects plant development by regulating gene expression. Recent analysis using the DNA microarray technique re...

    Akira Nagatani in Light Sensing in Plants (2005)

  8. No Access

    Article

    Dimers of the N-terminal domain of phytochrome B are functional in the nucleus

    A plant modulates its developmental processes in response to light by several informational photoreceptors such as phytochrome. Phytochrome is a dimeric chromoprotein which regulates various aspects of plant d...

    Tomonao Matsushita, Nobuyoshi Mochizuki, Akira Nagatani in Nature (2003)

  9. No Access

    Protocol

    Light-Induced Nuclear Targeting of PhytochromeB-sGreen Fluorescent Protein in Plants

    Phytochrome is a ubiquitous plant photoreceptor, that regulates various aspects of plant development (1). Phytochrome is a soluble chromoprotein of ∼120 kDa, to which a linear tetrapyrrole chromophore is covalent...

    Akira Nagatani, Tomonao Matsushita in Green Fluorescent Protein (2002)

  10. No Access

    Article

    Spatial distribution of phytochromes

    Phytochromes are chromoproteins which mediate several light responses in plants. Phytochrome proteins are encoded by a gene family which is currently being characterized in several plant species. Analysis of t...

    Akira Nagatani in Journal of Plant Research (1997)

  11. No Access

    Article

    Over-expression of a C-terminal region of phytochrome B

    In an attempt to identify domains directly involved in the signal transduction of phytochrome B (phyB), we over-expressed the achromophoric C-terminal half of phyB under control of the CaMV-35S promoter in tra...

    Koji Sakamoto, Akira Nagatani in Plant Molecular Biology (1996)