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Article
Open AccessDesign and implementation of Metta, a metasearch engine for biomedical literature retrieval intended for systematic reviewers
Individuals and groups who write systematic reviews and meta-analyses in evidence-based medicine regularly carry out literature searches across multiple search engines linked to different bibliographic databas...
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Open AccessStudying the potential impact of automated document classification on scheduling a systematic review update
Systematic Reviews (SRs) are an essential part of evidence-based medicine, providing support for clinical practice and policy on a wide range of medical topics. However, producing SRs is resource-intensive, an...
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Tasks, topics and relevance judging for the TREC Genomics Track: five years of experience evaluating biomedical text information retrieval systems
With the help of a team of expert biologist judges, the TREC Genomics track has generated four large sets of “gold standard” test collections, comprised of over a hundred unique topics, two kinds of ad hoc ret...
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Article
Open AccessOverview of BioCreative II gene normalization
The goal of the gene normalization task is to link genes or gene products mentioned in the literature to biological databases. This is a key step in an accurate search of the biological literature. It is a cha...
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Chapter
The Horizontal Chūshingura
Chūshingura as the primary national legend, an embellished tale that wags a remarkable true event of revenge, the subject of many woodblock prints, the perennial kabuki box office success, a venerable puppet play...
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Article
Open AccessThe TREC 2004 genomics track categorization task: classifying full text biomedical documents
The TREC 2004 Genomics Track focused on applying information retrieval and text mining techniques to improve the use of genomic information in biomedicine. The Genomics Track consisted of two main tasks, ad ho...
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Article
Open AccessEnhancing access to the Bibliome: the TREC 2004 Genomics Track
The goal of the TREC Genomics Track is to improve information retrieval in the area of genomics by creating test collections that will allow researchers to improve and better understand failures of their syste...
