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  1. Article

    Open Access

    Hairy cell leukemia variant and WHO classification correspondence Re: 5th edition WHO classification haematolymphoid tumors: lymphoid neoplasms

    Michael Grever, Leslie Andritsos, Mirela Anghelina, Evgeny Arons in Leukemia (2024)

  2. Article

    Open Access

    Impaired binding affinity of YTHDC1 with METTL3/METTL14 results in R-loop accumulation in myelodysplastic neoplasms with DDX41 mutation

    DEAD box helicase 41 (DDX41) mutations are the most prevalent predisposition to familial myelodysplastic syndrome (MDS). However, the precise roles of these variants in the pathogenesis of MDS have yet to be e...

    Won Chan Hwang, Kibeom Park, Silvia Park, Na Young Cheon, Ja Yil Lee in Leukemia (2024)

  3. Article

    Open Access

    heredERA Breast Cancer: a phase III, randomized, open-label study evaluating the efficacy and safety of giredestrant plus the fixed-dose combination of pertuzumab and trastuzumab for subcutaneous injection in patients with previously untreated HER2-positive, estrogen receptor-positive locally advanced or metastatic breast cancer

    HER2-positive, estrogen receptor-positive breast cancer (HER2+, ER+ BC) is a distinct disease subtype associated with inferior response to chemotherapy plus HER2-targeted therapy compared with HER2+, ER-negati...

    Sherko Kuemmel, Catherine Harper-Wynne, Yeon Hee Park, Fábio Franke in BMC Cancer (2024)

  4. Article

    Open Access

    Real-world efficacy and safety of capecitabine with oxaliplatin in patients with advanced adenocarcinoma of the ampulla of Vater

    Adenocarcinoma of the ampulla of Vater (AoV) is one of the rare periampullary cancers, and due to its anatomical location, it is categorized into various histologic subtypes. Its rarity and diversity pose chal...

    Seunghwan Lee, Se Jun Park, Kabsoo Shin, Tae Ho Hong, In-Ho Kim, Myung Ah Lee in BMC Cancer (2024)

  5. Article

    Open Access

    Prediction of TKI response in EGFR-mutant lung cancer patients-derived organoids using malignant pleural effusion

    Patient-derived organoids (PDOs) are valuable in predicting response to cancer therapy. PDOs are ideal models for precision oncologists. However, their practical application in guiding timely clinical decision...

    Sang-Hyun Lee, Kyuhwan Kim, Eunyoung Lee, Kyungmin Lee in npj Precision Oncology (2024)

  6. Article

    Open Access

    Pragmatic nationwide master observational trial based on genomic alterations in advanced solid tumors: KOrean Precision Medicine Networking Group Study of MOlecular profiling guided therapy based on genomic alterations in advanced Solid tumors (KOSMOS)-II study protocol KCSG AL-22–09

    Next-generation sequencing (NGS) has been introduced to many Korean institutions to support molecular diagnostics in cancer since 2017, when it became eligible for reimbursement by the National Health Insuranc...

    Sun Young Kim, Jee Hyun Kim, Tae-Yong Kim, Sook Ryun Park, Shinkyo Yoon in BMC Cancer (2024)

  7. Article

    Open Access

    Long-term oncologic outcomes of unselected triple-negative breast cancer patients according to BRCA1/2 mutations

    Triple-negative breast cancer (TNBC) patients are more likely to have BRCA1/2 mutations, with a prevalence rate of about 10–20%. Although several studies have analyzed the oncologic outcomes between BRCA1/2 carri...

    Woong Ki Park, Soo Yeon Chung, You ** Jung, Changhee Ha in npj Precision Oncology (2024)

  8. Article

    Open Access

    Integrated clinical and genomic models using machine-learning methods to predict the efficacy of paclitaxel-based chemotherapy in patients with advanced gastric cancer

    Paclitaxel is commonly used as a second-line therapy for advanced gastric cancer (AGC). The decision to proceed with second-line chemotherapy and select an appropriate regimen is critical for vulnerable patien...

    Yonghwa Choi, Jangwoo Lee, Keewon Shin, Ji Won Lee, Ju Won Kim, Soohyeon Lee in BMC Cancer (2024)

  9. Article

    Open Access

    mFOLFIRINOX versus mFOLFOX 6 as adjuvant treatment for high-risk stage III colon cancer - the FROST trial: study protocol for a multicenter, randomized controlled, phase II trial

    High-risk stage III colon cancer has a considerably poorer prognosis than stage II and low-risk stage III colon cancers. Nevertheless, most guidelines recommend similar adjuvant treatment approaches for all th...

    Kyung-Ha Lee, In Jun Yang, Gi Won Ha, Jaeim Lee, Youn Young Park in BMC Cancer (2024)

  10. Article

    Open Access

    ELAVL2 loss promotes aggressive mesenchymal transition in glioblastoma

    Glioblastoma (GBM), the most lethal primary brain cancer, exhibits intratumoral heterogeneity and molecular plasticity, posing challenges for effective treatment. Despite this, the regulatory mechanisms underl...

    Yona Kim, Ji Hyeon You, Yeonjoo Ryu, Gyuri Park, Urim Lee in npj Precision Oncology (2024)

  11. Article

    Open Access

    Transgelin-2, a novel cancer stem cell-related biomarker, is a diagnostic and therapeutic target for biliary tract cancer

    Biliary tract cancer (BTC) is a relatively rare but aggressive gastrointestinal cancer with a high mortality rate. Cancer stem cell (CSC) populations play crucial roles in tumor biology and are responsible for...

    Jung Hyun Jo, Soo Been Park, Joowon Chung, Taeyun Oh, Hee Seung Lee in BMC Cancer (2024)

  12. Article

    Open Access

    Real-world outcomes of third-line immune checkpoint inhibitors versus irinotecan-based chemotherapy in patients with advanced gastric cancer: a Korean, multicenter study (KCSG ST22-06)

    Immune checkpoint inhibitor (ICI) or irinotecan-based chemotherapy is frequently used after failure of second-line paclitaxel plus ramucirumab treatment for patients with locally advanced unresectable or metas...

    Sung Hee Lim, Keun-Wook Lee, Jae-Joon Kim, Hyeon-Su Im, In-Ho Kim in BMC Cancer (2024)

  13. Article

    Open Access

    Selpercatinib combination with the mitochondria-targeted antioxidant MitoQ effectively suppresses RET–mutant thyroid cancer

    Genetic alternation of REarranged during Transfection (RET) that leads to constitutive RET activation is a crucial etiological factor for thyroid cancer. RET is known to regulate mitochondrial processes, although...

    Wen**g Chen, Sophie Dream, Pui-Yin Leung, Pui-Kei Wu in npj Precision Oncology (2024)

  14. Article

    Open Access

    Comparison of partitioned survival modeling with state transition modeling approaches with or without consideration of brain metastasis: a case study of Osimertinib versus pemetrexed-platinum

    The partitioned survival model (PSM) and the state transition model (STM) are widely used in cost-effectiveness analyses of anticancer drugs. Using different modeling approaches with or without consideration o...

    Yoon-Bo Shim, Byeong-Chan Oh, Eui-Kyung Lee, Mi-Hai Park in BMC Cancer (2024)

  15. Article

    Open Access

    Integrative analysis of spatial and single-cell transcriptome data from human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis

    Recent studies using single-cell transcriptomic analysis have reported several distinct clusters of neoplastic epithelial cells and cancer-associated fibroblasts in the pancreatic cancer tumor microenvironment...

    Seongryong Kim, Galam Leem, Junjeong Choi, Yongjun Koh, Suho Lee in Genome Medicine (2024)

  16. Article

    Open Access

    Immunological subty** of salivary gland cancer identifies histological origin-specific tumor immune microenvironment

    Gene expression analysis enhances proper cancer subty**, a better understanding of the molecular characteristics of cancer, and strategies for precision medicine. However, salivary gland cancer (SGC) subtypi...

    Jiyun Hong, Eunwoo Choi, Dahee Kim, Mi-Kyoung Seo, Hyundeok Kang in npj Precision Oncology (2024)

  17. Article

    Open Access

    Systematic analysis of Mendelian disease-associated gene variants reveals new classes of cancer-predisposing genes

    Despite the acceleration of somatic driver gene discovery facilitated by recent large-scale tumor sequencing data, the contribution of inherited variants remains largely unexplored, primarily focusing on previ...

    Seulki Song, Youngil Koh, Seokhyeon Kim, Sang Mi Lee, Hyun Uk Kim in Genome Medicine (2023)

  18. Article

    Open Access

    PSMD1 as a prognostic marker and potential target in oropharyngeal cancer

    Despite the diverse genetic mutations in head and neck cancer, the chemotherapy outcome for this cancer has not improved for decades. It is urgent to select prognostic factors and therapeutic targets for oroph...

    Hae Chan Park, Hyo** Kim, Ji-Yeong Kim, Hye-Yeon Lee, **yi Lee, WonJae Cha in BMC Cancer (2023)

  19. Article

    Open Access

    Beyond the exome: utility of long-read whole genome sequencing in exome-negative autosomal recessive diseases

    Long-read whole genome sequencing (lrWGS) has the potential to address the technical limitations of exome sequencing in ways not possible by short-read WGS. However, its utility in autosomal recessive Mendelia...

    Lama AlAbdi, Hanan E. Shamseldin, Ebtissal Khouj, Rana Helaby in Genome Medicine (2023)

  20. Article

    Open Access

    Pre-operative clonal hematopoiesis is related to adverse outcome in lung cancer after adjuvant therapy

    Clonal hematopoiesis (CH) frequently progresses after chemotherapy or radiotherapy. We evaluated the clinical impact of preoperative CH on the survival outcomes of patients with non-small cell lung cancer (NSC...

    Jae Kwang Yun, Sugyeong Kim, Hongyul An, Geun Dong Lee, Hyeong Ryul Kim in Genome Medicine (2023)

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