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A Coculture System for Modeling Intestinal Epithelial-Fibroblast Crosstalk

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  1. Protocol

    Correction to: Identification and Localization of Cell Types in the Mouse Olfactory Bulb Using Slide-SeqV2

    Ai Fang, Kaitlyn Petentler, Andrew Price, Seth Malloy in The Olfactory System (2023)

  2. Protocol

    Medical Image Segmentation Using Deep Learning

    Image segmentation plays an essential role in medical image analysis as it provides automated delineation of specific anatomical structures of interest and further enables many downstream tasks such as shape a...

    Han Liu, Dewei Hu, Hao Li, Ipek Oguz in Machine Learning for Brain Disorders (2023)

  3. Protocol

    Correction to: Plant Phosphopeptide Identification and Label-Free Quantification by MaxQuant and Proteome Discoverer Software

    In the original version of this book, the title of chapter 13 was published with a typographical error. It has now been rectified in the revised version of this book.

    Shalan Li, Haitao Zan, Zhe Zhu, Dandan Lu, Leonard Krall in Plant Phosphoproteomics (2021)

  4. Protocol

    MRI Map** of the Blood Oxygenation Sensitive Parameter T2* in the Kidney: Basic Concept

    The role of hypoxia in renal disease and injury has long been suggested but much work still remains, especially as it relates to human translation. Invasive pO2 probes are feasible in animal models but not for hu...

    Lu-** Li, Bradley Hack, Erdmann Seeliger in Preclinical MRI of the Kidney (2021)

  5. Protocol

    Development of a Mouse-Adapted MERS Coronavirus

    First identified in 2012, Middle East respiratory syndrome coronavirus (MERS-CoV) is a novel virus that can cause acute respiratory distress syndrome (ARDS), multiorgan failure, and death, with a case fatality...

    Kun Li, Paul B. McCray Jr. in MERS Coronavirus (2020)

  6. Protocol

    Evolution of Viral Genomes: Interplay Between Selection, Recombination, and Other Forces

    Natural selection is a fundamental force sha** organismal evolution, as it both maintains function and enables adaptation and innovation. Viruses, with their typically short and largely coding genomes, exper...

    Stephanie J. Spielman, Steven Weaver, Stephen D. Shank in Evolutionary Genomics (2019)

  7. Protocol

    Correction to: Analysis of Population-Genetic Properties of Copy Number Variations

    The original version of the book was inadvertently published with incorrect spelling of the author name “Liu Yang”. The author name has now been corrected.

    Lingyang Xu, Liu Yang, Derek M. Bickhart, JunYa Li, George E. Liu in Copy Number Variants (2018)

  8. Protocol

    Correction to: A Practical Guide to Molecular Dynamics Simulations of DNA Origami Systems

    Correction to: Chapter 15 in: Giampaolo Zuccheri (ed.), DNA Nanotechnology: Methods and Protocols, Methods in Molecular Biology, vol. 1811, https://doi.org/10.1007/978-1-4939-8582-1_15

    Jejoong Yoo, Chen-Yu Li, Scott Michael Slone, Christopher Maffeo in DNA Nanotechnology (2018)

  9. Protocol

    Erratum to: Delivery of the Porcupine Inhibitor WNT974 in Mice

    Li-shu Zhang, Lawrence Lum in Wnt Signaling (2016)

  10. Protocol

    Studying Coronavirus–Host Protein Interactions

    To understand the molecular mechanisms of viral replication and pathogenesis, it is necessary to establish the virus–host protein interaction networks. The yeast two-hybrid system is a powerful proteomic appro...

    Chee-Hing Yang, Hui-Chun Li, Cheng-Huei Hung, Shih-Yen Lo in Coronaviruses (2015)

  11. Protocol

    Simultaneous Detection and Differentiation of Respiratory Syncytial Virus and Other Respiratory Viral Pathogens

    Rapid and accurate detection of respiratory syncytial virus (RSV) provides pathogen-specific diagnosis, allows implementation of appropriate infection control measures, and improves patient management. One dia...

    Susan E. Sefers, Hai**g Li, Yi-Wei Tang in Diagnostic Virology Protocols (2011)

  12. Protocol

    Identification of Viral Peptide Fragments for Vaccine Development

    We report a simple method for identifying foldable viral surface protein fragments in a random but systematic manner. The method involves digestion and reassembly of a target gene to generate a pool of smaller...

    Zhanglin Lin, Shuang Li, Yong Chen in Viral Applications of Green Fluorescent Protein (2009)

  13. Protocol

    Use of GFP to Investigate Expression of Plant-Derived Vaccines

    Plants are low-cost bioreactors for the production of various biopharmaceuticals including oral vaccines. Plant-derived oral vaccines are potentially useful in combating viral infections involving mucosal immu...

    Hong-Ye Li, Mee-Len Chye in Viral Applications of Green Fluorescent Protein (2009)

  14. Protocol

    Mammalian Two-Hybrid Assay for Detecting Protein-Protein Interactions in Vivo

    The mammalian two-hybrid system is a very powerful tool to investigate protein-protein interactions in terms of functional domains and identify potential binding ligands and partners of a protein. Compared wit...

    Runtao He, Xuguang Li in Genomics Protocols (2008)

  15. Protocol

    A Pancoronavirus RT-PCR Assay for Detection of All Known Coronaviruses

    The recent discoveries of novel human coronaviruses, including the coronavirus causing SARS, and the previously unrecognized human coronaviruses HCoV-NL63 and HCoV-HKU1, indicate that the family Coronaviridae har...

    Leen Vijgen PhD, Elien Moës, Els Keyaerts PhD, Sandra Li in SARS- and Other Coronaviruses (2008)

  16. Protocol

    Application of siRNA Against SARS in the Rhesus Macaque Model

    Containment of the SARS coronavirus (SCV) outbreak was accompanied by the rapid characterization of this new pathogen's genome sequence in 2003, encouraging the development of anti-SCV therapeutics using short...

    Qingquan Tang, Baojian Li, Martin Woodle, Patrick Y. Lu in RNAi (2008)

  17. Protocol

    Sensitive Detection of SARS Coronavirus RNA by a Novel Asymmetric Multiplex Nested RT-PCR Amplification Coupled With Oligonucleotide Microarray Hybridization

    We have developed a sensitive method for the detection of specific genes simultaneously. First, DNA was amplified by a novel asymmetric multiplex PCR with universal primer(s). Second, the 6-carboxytetramethylr...

    Zhi-wei Zhang, Yi-ming Zhou, Yan Zhang, Yong Guo in Microarrays in Clinical Diagnostics (2005)