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    Chapter and Conference Paper

    Resolving Multicopy Duplications de novo Using Polyploid Phasing

    While the rise of single-molecule sequencing systems has enabled an unprecedented rise in the ability to assemble complex regions of the genome, long segmental duplications in the genome still remain a challen...

    Mark J. Chaisson, Sudipto Mukherjee… in Research in Computational Molecular Biology (2017)

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    Chapter and Conference Paper

    Simultaneous Structural Variation Discovery in Multiple Paired-End Sequenced Genomes

    Next generation sequencing technologies have been decreasing the costs and increasing the world-wide capacity for sequence production at an unprecedented rate, making the initiation of large scale projects aim...

    Fereydoun Hormozdiari, Iman Hajirasouliha… in Research in Computational Molecular Biology (2011)

  3. No Access

    Chapter and Conference Paper

    Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes

    Recent studies show that, along with single nucleotide polymorphisms and small indels, larger structural variants among human individuals are common. These studies have typically been based high-cost library g...

    Fereydoun Hormozdiari, Can Alkan… in Research in Computational Molecular Biology (2009)